Variovorax sp. PAMC26660: H7F35_12910
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Entry
H7F35_12910 CDS
T10234
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7F35_12910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaz03019
]
H7F35_12910 (recQ)
03400 DNA repair and recombination proteins [BR:
vaz03400
]
H7F35_12910 (recQ)
Enzymes [BR:
vaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7F35_12910 (recQ)
Messenger RNA biogenesis [BR:
vaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7F35_12910 (recQ)
DNA repair and recombination proteins [BR:
vaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H7F35_12910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNK70517
UniProt:
A0A7G8VQX4
LinkDB
All DBs
Position
complement(2670407..2672302)
Genome browser
AA seq
631 aa
AA seq
DB search
MSSLAPHPLDDAPGSAAPADILHEVFGYSQFRGAQQDIVDHVVAGGDALVLMPTGGGKSL
CYQIPAIARQRAGHGVSVVVSPLIALMHDQVGALHEAGVNAAFLNSTLDWEQTQDVERRM
LRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTV
LHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKDATTQL
LRFIEREHEGDAGVVYCQSRKRVEELAVTLRDAGINALPYHAGLDAAVRQKHQDRFLREE
GVVMVATIAFGMGIDKPDVRFVGHIDMPKNIEGYYQETGRAGRDGGPADAWMTYGLNDVV
NQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYFGEKSTPCGNCDNCLNP
PQVWDGTDAARKLLSTIYRVQQLSGISFGAGHVMDILRGKSTEKVKQFGHERISTFGLGA
EFSEVQLRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVLKGEAAVTLRESVSSPTERKS
RREKVAKGAPSPAAAKLDDVGKKRFEALKAWRAEVAKEHNLPAYVIFHDATLASIAERAP
ATLEDLQGISGIGTKKLEAYGTEVLRVCEAF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctctcttgccccccatcccctcgacgacgcccccggcagcgcagcacccgccgac
atccttcacgaagtcttcggctactcgcagttccggggtgcccagcaggacatcgtcgac
cacgtggtggcaggcggcgacgcgctggtgctgatgcccacgggcggcggcaagtcgctg
tgctaccagatcccggccatcgcgcggcagcgcgcggggcatggcgtgtcggtggtggtg
tcgccgctgatcgcgctgatgcacgatcaggtgggcgcgctgcacgaagccggcgtgaac
gccgctttcttgaattccacgctcgactgggaacagacccaggacgtggagcgccgcatg
ctgcgcggcgagatcacgctgctgtacgcggcgcccgagcgcgtgaacacgccgcgcttt
ctgtcgcagctcgattcgctgaaggagcgcggcaagctgtcgctgttcgcgatcgacgag
gcgcattgcgtgagccagtggggccacgacttccgccccgagtaccgcgcgctcacggtg
ctgcacgagcgctatgcgggcgtgccgcgcatcgcgctcacggccacggccgacgacctg
acgcgcgccgacatcgtcgagcggctgcagctcgaagaggcgcgccagttcgtctccagc
ttcgaccggccgaacatccgctacaccatcgtcgagaagaaggacgccaccacgcagttg
ctgcgcttcatcgagcgcgagcacgaaggcgatgcgggcgtggtctattgccagtcgcgc
aagcgcgtggaagagctggcggtgacgctgcgcgacgcgggcatcaacgcgctgccgtac
cacgcggggctcgatgcagccgtgcgccagaagcaccaggaccgcttcctgcgcgaagaa
ggcgtggtgatggtcgcgaccatcgctttcggcatgggcatcgacaagcccgacgtgcgt
ttcgtcggccacatcgacatgccgaagaacatcgagggctactaccaggaaaccggtcgc
gcgggccgcgacggcggccccgccgacgcctggatgacctacggcctgaacgacgtggtg
aaccagcgccgcatgatcgacgagagcccagccggcgaagagttcaagcaggtgatgcgc
ggcaagctcgatgcgctgctctcgctcgccgaggcgagcgactgccggcgcgtgcgcctg
ctgggctacttcggcgaaaagagcacgccttgcggcaactgcgacaactgcctgaacccg
ccgcaggtgtgggacggcaccgatgccgcgcgcaagctgctcagcaccatctaccgcgtg
cagcagctcagcggcatcagcttcggcgcggggcatgtcatggacatcctgcgcggcaag
tcgaccgagaaggtcaagcagttcggccacgagcgcatcagcaccttcgggctgggcgcg
gagttcagcgaagtgcagttgcgcggcgtgctgcggcaactgatcgccacgggcgcgctg
gcggtggatgcggaagcgttcaacacgctgaagctcaccgaagggtcgcgcgcggtgctc
aagggcgaggcggcggtgacgctgcgcgagtcggtctcgtcaccgacggagcgcaagtcc
cggcgcgagaaagtcgccaagggcgcgccttcgccggcggcggccaagctggacgacgtc
ggcaaaaagcgcttcgaggcgctcaaggcctggcgcgccgaggtcgcgaaagagcacaac
ctgccggcttacgtgatcttccacgacgcgacgctggcctcgattgccgagcgcgcaccc
gccacgctcgaagacctgcagggcatcagcggcatcggcaccaagaagctcgaggcttac
ggcaccgaagtgctgcgggtctgcgaggcgttctag
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