Variovorax sp. PAMC26660: H7F35_14610
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Entry
H7F35_14610 CDS
T10234
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03420
Nucleotide excision repair
vaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7F35_14610
03430 Mismatch repair
H7F35_14610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaz03400
]
H7F35_14610
Enzymes [BR:
vaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7F35_14610
DNA repair and recombination proteins [BR:
vaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7F35_14610
MMR (mismatch excision repair)
Other MMR factors
H7F35_14610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
NACHT
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QNK71582
UniProt:
A0A7G8VTY9
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All DBs
Position
3037306..3039354
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AA seq
682 aa
AA seq
DB search
MATLNEAQRAAVEHGVGAAVGGDHRPLLVIAGAGSGKTSTLAHRVAHLIAGGVDPQRLLL
LTFSRRAAQEMGRRAGQVLGRVLGLQSAVPPALQWAGTFHGIGARLLREYAPQIGLDENF
TIHDRGDAEDLMGLVRHELGLSSTVNRFPRKGTCLSIYSRCVNTRAPLAEVLKESFPWCD
EWEAELKKLFGGYVEAKQQQNVLDYDDLLLYWAEMVAEPTLAAQIGARFDHVLVDEYQDT
NLLQASILLALKPDGRGVTVVGDDAQSIYSFRGATVRNILDFPSQFTQAARLVTLERNYR
STQPILDVSNRVIAHAAERHAKTLWTDKPSAGKPLLVLVPDDAGQARWVADKVLAHREGG
LALKSQAVLFRTSAHSAGLELELARRNIPFMKYGGLKFLEASHVKDLLAVLRFAQNPRGR
MAGFRVTQLIPGIGPVTGTRLLDAMDQAADPVAAVRDFVPPSAARAQWADFVKAYAALRA
PSLTWPADVELAMDWYQPHLERLYEDTSGVRRADVEQLARLAAGYGSRESFLTELTLDPP
EATSDRPGPPLLDEDFLILSTIHSAKGQEWSSVHVLNVVDGCMPADVAQGAHELEEERRL
LYVAMTRARDHLHLLVPQRFYIPQQAARGDRHLYANRTRFIPDADLAGFEQQAWPPAPVL
PPAVPPPAAVIDLRNRMRAAWR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ctggcaacgctcaatgaagcgcagcgcgcggcggtcgagcatggggtgggcgcggccgtg
ggtggcgaccatcgcccgctgctcgtgattgccggcgcgggctccggcaagaccagcacg
ctggcgcatcgggtggcgcatctgatcgcgggtggcgtcgatccgcaacgactgctgctg
ctgactttctcgcgccgtgccgcgcaggaaatggggcgccgtgcgggccaggtgctgggg
cgggtgctcggcctgcaatcggcggtgccgcctgcgctgcaatgggctggcacctttcac
ggcatcggcgcgcggctgctgcgcgagtacgcaccgcagatcggcctggacgagaacttc
accatccacgaccggggcgatgccgaagacctgatggggctggtgcggcacgagctgggc
ctgtcgtccaccgtcaatcgtttcccgcgcaagggcacctgcctgtcgatctactcgcgc
tgcgtcaacacccgcgcgccgctggccgaggtgctcaaggaatcctttccctggtgcgac
gaatgggaggccgaactcaagaaactgttcggtggctacgtggaggccaagcagcagcag
aacgtgctcgactacgacgacctgctgctctactgggccgagatggtcgccgagcccacg
ctggccgcgcagatcggcgcgcgcttcgaccatgtgctggtcgacgaataccaggacacc
aacctgctgcaggcctcgatcctgctggcgctcaagcccgatggccgtggcgtgacggtg
gtgggcgacgacgcgcagtcgatctattcgtttcgcggcgcgacggtgcgcaacatcctc
gactttccctcgcagttcacgcaggcggcgcgcttggtcacgctggagcgcaactaccgt
tcgacgcagccgatcctcgatgtgtcgaaccgtgtgatcgcgcatgcggccgagcggcac
gccaagacgctctggaccgacaagccctcggccggcaagccgctgctggtgctcgtgccc
gacgatgcggggcaggcgcgctgggtggccgacaaggtgctcgcgcatcgcgagggcggg
ctggcgctgaagtcgcaggcggtgctgttccgcacctcggcgcacagcgcggggctcgaa
ctcgaactggcgcggcgcaacatccccttcatgaaatatggcggcctcaagttcctggag
gcctcgcatgtgaaagacctgctcgcggtgctgcgctttgcccagaacccgcgcgggcgc
atggcgggctttcgcgtgacgcagttgattccgggcatcgggcctgtcaccggcacgcgg
ctgctcgatgcgatggaccaggcggccgatcctgtcgcagcggtgcgcgatttcgtgccg
ccgtctgcagcacgcgcgcaatgggctgacttcgtaaaagcctatgccgcgctgcgtgcg
ccttcactgacatggccggccgatgtggaactggcgatggactggtatcagccgcatctg
gagcggctgtacgaggacacctccggcgtgcgccgtgccgacgtcgagcagcttgcacgg
cttgccgccggctatggttcgcgcgagagcttcctcaccgaactcacgctcgatccgccc
gaagccaccagcgatcgccccgggccgccgctgctcgacgaggacttcctgatcctctcg
accatccattcggccaaggggcaggaatggagttcggtgcatgtgctcaacgtggtcgac
ggctgcatgccggccgacgtggcgcagggcgcgcacgaactcgaagaagagcgccggctg
ctctacgtggcgatgacgcgggcgcgtgaccatctgcacctgctggtgccgcagcgcttc
tacatcccgcagcaggcggcgcgcggtgaccggcatctgtacgcgaaccgcacgcgcttc
attcccgacgccgatctcgcgggcttcgagcagcaggcctggccgcctgcgccggtgttg
cctcccgcggtgccgccgccggccgccgtgatcgacctgcgcaaccgcatgcgcgccgct
tggcgctga
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