KEGG   Variovorax sp. PAMC26660: H7F35_15180
Entry
H7F35_15180       CDS       T10234                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_15180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_15180
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_15180
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QNK70940
LinkDB
Position
3174734..3176086
AA seq 450 aa
MSTPPDPFAAFESERTVIKPKPRTPGGTPPAPAPAQFFGGPDPTPAAEVGELGLLNPLVS
AAGKLLVLIGKLRNLAQPPNVPALRASTADAVNQFDAGARRAGVSNESVLAARYVLCTAL
DEAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVLA
LGFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPPLEAELSPHWRGQGAGTVRLRESLPLW
VFAAGFALLLALAWFGLRLTLNYRSDTTYSAVSGLRVPNLQIAPPAAPAKSPRLARFLEP
EIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMASSLPVLRRIGQALAEVKGDVLITGH
SDNQPIRSLRYPSNWHLSAARADAVKGALTTLVDPARMRSDGKADAEPVAPNDTPANRAR
NRRVDIVLLTEPDRVAAAAASAAPVPGATK
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagcacccctccggacccctttgccgccttcgaatcggaacgcacggtcatcaagccc
aagccgcgcacgccgggcggcacgccaccggcgcccgcgcccgcacagttcttcggcggt
cccgatccgacgccggccgccgaggtcggcgagctgggcctgctcaatccgctcgtgtct
gccgcgggcaagctgctggtgctgatcggcaagctgcgcaacctcgcgcaaccgccgaac
gtgccggcgctgcgtgcgtccaccgccgatgccgtcaaccagttcgatgccggcgcgcgc
cgcgccggtgtcagcaacgaatcggtgttggccgcgcgctatgtgctgtgcaccgcgctc
gacgaggccgtggccaacacgccctggggcgtgcaggccggctggaacaagcaaagcctg
ctggtgcagttccacaacgagacctggggcggcgagaaggtgttccagctgctggccaag
ctcgcgcaggacgtgcccacgcaccggcagttgctggagctgatctacagcgtgctcgcc
ctcggcttcgagggccgctaccgcgtggtcgacaacggccgtgcgcagctcgactcggtg
cgccagcgcctggccgacctgatcgccaaagaccggccgccgctcgaagccgaactctcg
ccgcactggcgcgggcagggcgcgggcacggtgcggctgcgcgaatcgctgccgctgtgg
gtcttcgcggcgggctttgcgctgctgctcgcgctcgcgtggttcggcctgcggctcacg
ctcaactaccgctccgacaccacctactcggcggtgtccggcttgcgcgtgcccaacctg
cagatcgcgccgccggctgcgccggccaagtcgccgcggctcgcgcgttttctcgaaccc
gagatcaagcagggcctggtgacggtgaccgatgaagccgaccgcagtgtggtgcgcctg
cgcggcgattccttcttcggctccggcagcgccgagccgatggcctcttcgctgccggtg
ctgcgccgcatcggccaggcgctggccgaggtgaagggcgatgtgctcatcaccggccat
tccgacaaccagccgatccgctcgctgcgctatccgtcgaactggcatctgtcggccgcg
cgcgccgatgcggtaaagggcgcgctgaccacactggtcgacccggcgcgcatgcgctcc
gacggcaaggccgacgccgaaccggtggcgcccaacgacacgccggccaaccgcgcgcgc
aaccgccgcgtcgacatcgtgctgctgaccgagcccgaccgtgtcgccgctgcggctgcc
tcggctgctcccgtccccggagcaacgaaatga

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