KEGG   Variovorax sp. PAMC26660: H7F35_15185
Entry
H7F35_15185       CDS       T10234                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_15185 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_15185 (tssM)
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_15185 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF7269
Other DBs
NCBI-ProteinID: QNK70941
UniProt: A0A7G8VS48
LinkDB
Position
3176083..3179685
AA seq 1200 aa
MIKKIFGFLFSPLLLTLLALIVVALLIWWIGPLVKIGALVPLESEMVRAIVIGVIVLIVV
LRALYRRWRARRASQHLTDGLMKAPAAKTDAPVNGEQKILDTRFSEAVATLKQMRLHAAG
KKPGWRDWMSISGGSYLYDLPWYVFIGAPGAGKTTALVNSGLSFPLAEKFGPGAIRGVGG
TRNCDWWFTDEAVLIDTAGRYTTQDSHQSEDKSAWEGFLGLLKKARPRRPLNGVFLTVSV
ADLLSQGPEARTQLAASIRARLLELDGKLTTRLPVYVLVTKSDLLYGFTDYFDDLGKEQR
AQVFGFTLPPEEVVQVDEKGMSAAFQREFALLHNRINDGLIARMQRETDGTRRAAIFGFP
AQFGSIGSLLSDLLDQVFTGSRFAQPPWVRGVYFTSGTQEGSPIDRVMGSLSRSFGIERA
MLAPQKSSGRSYFLTSLLRDVVFPEQRLAGADVKLERRRHTLRVIGVTAMTLVTVGLLAA
WGYSTLQNMNYLKSVEARVAPAQQTLAALPARVQNLVEVAPVLQGLRDIWKTPDNHQGDE
PLSMTLGLYQGDKLDAAAMLTHQRALNDAFLPQIAKRIEDQLRTAQKDNLEYTYEALKSY
LMLYQPEHFDAEALKAWITLDWSRSLDRGIPEDQRKALEDQLDVLIAQGPPRSPLKMDEN
LVRSVRAVLASYPLEQRVFSRLKRQRASKDIPGFSVATATGPSGPLVFERISGKPLTEGV
PGMFTYDGYHKRFQNEVTVLTGLLAAEDPWVLGQDRNTADRLRDVAALGALTDRVRRLYL
EEYVKQWEALLADVRLIRANGLEKNIETARILSGVDSPLANFLRAVVKQTTLIPQGEAGK
DVVSKAAESVRNTRKGLEDLFGGDPGKQVAPGKRIESIVDDRFEPLRRLVTAGGPNQPAP
IDDALKLFNEVYVYLNAVDTAVKGRTSPPPGDVAGKLKSDAGRLPEPVRTMVENLSQSGA
AQAQVAERGNLSQDLRPVAEFCARAIAGRYPFVPGSKRDVLPEDFGQMFGPGGLMDDFFQ
KRLAALVDTSTRPWRYKPVAERGAITTQALAQFERAARIKDIFFRAGGRSPSMRLDFKPV
EMDAGITQFILDVDGQLVKYAHGPVVPMAVQWPGPKGSNQVRIQVSPPSTTGSSGSAVDG
PWALFRALDDGQLEAGDAPEKFFITFQIGARKTRFEVTTNSVQHPIRLRELREFSCPEGL
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgatcaagaaaatcttcggcttcctgttcagcccgctgctgctgaccctgctggcgctg
atcgtcgtcgcgctgctgatctggtggatcggcccgctggtgaagatcggcgcgctggtg
ccgctcgaaagcgaaatggtgcgcgccatcgtcatcggcgtgatcgtgctgatcgtcgtg
ctgcgcgcgttgtatcgccgctggcgcgcgcgccgtgcgagccagcacctgaccgatggg
ctcatgaaggcgccggccgccaagaccgatgcgcccgtcaacggcgagcagaagatcctc
gacacccgcttcagcgaagccgttgccacgctcaagcagatgcgcctgcatgccgccggc
aagaagcccggctggcgcgactggatgtcgatctcgggtggcagctacctgtacgacctg
ccgtggtacgtgttcatcggcgcgccgggcgcgggcaagaccaccgcactggtcaactcg
ggcttgagctttccgctggccgagaagttcggccccggcgccattcgcggcgtgggcggc
acgcgcaactgcgactggtggttcaccgacgaggccgtgctcatcgacaccgccggccgc
tacaccacgcaggacagccaccagtcggaagacaagagcgcgtgggaaggcttcctgggc
ctgttgaagaaggcgcgcccgcgccgcccgctcaacggcgtgttcctcaccgtcagcgtg
gccgacctgctgagccagggccccgaggcgcgcacgcagctcgcggcctcgatccgcgcg
cgcctgctcgaactcgacggcaagctcaccacacgcctgccggtgtacgtgctcgtcacc
aagagcgacctgctgtatggctttaccgactacttcgacgacctcggcaaggagcagcgc
gcgcaagtcttcggcttcacgctgccgcccgaagaagtcgtgcaggtcgatgaaaagggc
atgtcggccgcgttccagcgcgagttcgcgttgctgcacaaccgcatcaacgacgggctg
atcgcacgcatgcagcgcgagaccgatggcacgcgccgcgcggcgatcttcggttttccg
gcgcagttcggctccatcggctcgctgctgtccgacctgctcgaccaggtgttcaccggc
tcgcgcttcgcgcagccgccgtgggtgcgcggcgtgtacttcaccagcggcacgcaggaa
ggcagcccgatcgaccgcgtgatgggcagcctgtcgcgcagcttcggcatcgagcgcgcg
atgctcgcgccgcaaaagagcagcggtcgcagctacttcctcacatcgttgctgcgcgac
gtggtgttccccgagcagcgcctcgcgggcgccgacgtgaagctggagcgccgccgccac
acgctgcgcgtgatcggcgtcaccgcgatgacgctcgtcaccgtcggcctgctcgcagcc
tggggctacagcacgctgcagaacatgaactacctgaagtcggtcgaggcccgcgtcgcg
cccgcgcagcagaccctggctgcgctgccggcgcgcgtgcagaacctggtcgaggtcgcg
cccgtgctgcagggcctgcgcgacatctggaagacgcccgacaaccaccagggcgacgag
ccgctgtcgatgacgctgggcctctaccagggcgacaagctcgatgcggccgccatgctc
acgcaccagcgcgcgctcaacgacgccttcctgccgcagatcgccaagcgcatcgaagac
cagttgcgcaccgcgcagaaagacaacctggagtacacctacgaggcgctcaagagctac
ctgatgctctaccagcccgagcacttcgatgcggaggcgctcaaggcctggatcacgctc
gactggtcgcgcagcctggaccgcggcattcccgaagaccagcgcaaggcactcgaagac
cagctcgacgtgctcatcgcccaaggtccgccgcgctcgccgctgaagatggacgaaaac
ctggtgcgcagcgtgcgcgccgtgctcgcgagctatccgctggagcagcgcgtgttcagc
cgcctcaagcgccagcgcgccagcaaggacatcccgggcttcagcgtggccacggccacc
ggtccttcgggaccgctggtgttcgagcgcatcagcggcaagccgttgaccgaaggcgtg
ccgggcatgttcacctacgacggctatcacaagcgcttccagaacgaagtgaccgtgctc
accggcctgctggcggccgaagacccgtgggtgctcgggcaggaccgcaacaccgccgac
cgcctgcgcgacgtggccgcgctcggcgcgctcaccgatcgcgtgcgtcgcctttatctg
gaggagtacgtcaagcagtgggaagcactgcttgccgacgtgcgcctgatccgcgccaac
gggttggagaagaacatcgagaccgcgcgcatcctctcgggcgtcgattcgccgctggcc
aacttcttgcgcgcggtggtgaaacagaccacgctgatcccgcaaggcgaagccggcaag
gacgtggtcagcaaggccgccgagtccgtgcgcaacacccgcaagggcctggaagacctg
ttcggcggcgaccctggcaagcaggtggcgccgggcaagcgcatcgagagcatcgtggac
gaccgcttcgagccgctgcgccgcctcgtcaccgccggcggccccaaccagcctgcgccc
atcgacgatgcgctcaagctcttcaacgaggtgtacgtgtatctcaacgccgtcgacacg
gcggtcaagggccgcacctcgccgccacccggtgacgtggcgggcaagctcaagtccgac
gccggccgcctgccagagcccgtgcgcaccatggtcgagaacctgagtcagtcgggcgcg
gcgcaggcccaggtggccgagcgtggcaatctgagccaggacctgcgtcccgtggccgag
ttctgcgcgcgcgccattgccggccgttatcccttcgtgcccggcagcaagcgcgacgtg
ctgcccgaagacttcggccagatgttcggccccggtggcctgatggacgacttcttccag
aagcgcctggccgcgctggtcgacaccagcacgcggccgtggcgctacaagcccgtggcc
gaacgcggggccatcaccacgcaggcgctggcgcagttcgagcgcgccgcgcgcatcaag
gacatcttctttcgcgctggcggccgcagcccgtcgatgcggctggacttcaagccggtg
gagatggacgcgggcatcacgcagttcatcctcgacgtcgatggccagctcgtgaagtac
gcgcacggccccgtggtgccgatggccgtgcagtggccgggtccgaagggcagcaaccag
gtgcgcatccaggtcagcccgccgtcgaccaccggcagctcgggctcggcggtcgatggg
ccgtgggcgctgttccgtgcgctcgacgatggccagctcgaagcgggcgacgcgcccgag
aagttcttcatcaccttccagatcggcgcgcgcaagacgcgtttcgaagtgacgacgaac
agcgtgcagcatccgatccggctgcgtgagctgcgggagttttcctgcccggaggggttg
tga

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