KEGG   Variovorax sp. PAMC26660: H7F35_15405
Entry
H7F35_15405       CDS       T10234                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    H7F35_15405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vaz03400]
    H7F35_15405
Enzymes [BR:vaz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     H7F35_15405
DNA repair and recombination proteins [BR:vaz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     H7F35_15405
 Prokaryotic type
     H7F35_15405
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QNK70981
UniProt: A0A7G8VS88
LinkDB
Position
3228998..3229705
AA seq 235 aa
MSRPDQLSSSDPADWPVAPGWQSLVDEFFAGAVGQKLQGFLRERLDAGAVIFPPQPLRAL
ELTPPEDVRVVILGQDPYHGRGQAEGLAFSVAPGVALPPSLRNIFKELQRDLGTAPPPFP
NPGGSLVKWATHGVLLLNTCLTVEEAQPASHAGRGWEVFTDAVIRHVSAGEKSVVFMLWG
SHAQSKRALIDVGRHKVLMSNHPSPLSALRPPVPFIGCGHFGEARAWREAQQSQG
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagccggcccgatcagctgtcgagcagcgatcctgccgattggccggtggcgccgggc
tggcaatcgctggtcgatgagttcttcgctggtgctgtcgggcagaagttgcagggtttc
ctgcgcgaacgccttgatgcgggcgcggtgatctttccgccgcagccgctgcgggcgctg
gaactgacgccgcccgaagacgtgcgcgtggtgatcctgggtcaggacccgtaccacggc
cgcggccaggccgaagggctggcgttttcggtggcgcccggcgtggcactgccgccgtcg
ctgcgcaacatcttcaaggaattgcagcgcgacctggggacggccccgccgccgtttccc
aatcctggcggcagcctggtgaagtgggcgacccatggcgtgctgttgctcaacacctgc
ctgacggtcgaggaggcgcagccggccagccacgcggggcgcggctgggaagtgttcacg
gatgccgtcattcgccatgtttcggccggcgagaagtctgttgtttttatgctatggggc
tcacacgcacagagtaagcgcgcgttgatcgacgttgggcgccataaggtgctgatgtcg
aatcatccgtcgccactttctgcgttgcgcccgccggtgccgttcatcggctgcggacat
ttcggcgaagcgcgtgcgtggcgggaggcgcagcaatcgcaggggtga

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