Variovorax sp. PAMC26660: H7F35_16915
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Entry
H7F35_16915 CDS
T10234
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vaz Variovorax sp. PAMC26660
Brite
Enzymes [BR:
vaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H7F35_16915
Transfer RNA biogenesis [BR:
vaz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H7F35_16915
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GFIT
Other DBs
NCBI-ProteinID:
QNK71255
UniProt:
A0A7G8VT12
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Position
complement(3556292..3558358)
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AA seq
688 aa
AA seq
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MFVLFEEAGKYLGGRVLSEAEASAQVELETGKRVKVKGANIVLRFEKPSPTELIAQARTL
AAAMDLDLAWEFAAEGEFGFADLAADYYSDKPSLAQQAAALFALFEAPHYFRRAGKGRFK
KAPAEIVQQALAAIEKKKAVQAQIVEWAGQLAEGVCPPPIREQLYKILFKPDKNAPEYKA
VVDASRATQRPPLDLLERAGAIDSPYQFHWRRFLFENFPKGTGFPALAAPAIVDDLPVAV
GVQAFSIDDSQTTEIDDALSVQGLGSGTVTVGIHIAAPALALTPGSAIDNVARARMSTVY
MPGYKITMLPDEVVNTYTLLEGGDRPAVSLYARFDEATLELQGTETKLERVPIVANLRHD
QLDAVVTQPWLEDAAFTNDNTPEAAANLRAPLSFLFRLAKQLKAQREVVRGKPENFNRPD
YNFRLVGNDGNEPTGNEQVQISTRQRGAPLDLIVSEAMILANSTWGSWLGELGVPGLYRS
QASLAPGIKVRMGTRALPHAGLGVKSYAWSTSPLRRYTDLVNQWQIIAAARHGKTAALAA
PFKPKDADLFSILSGFDAAYATYNGYQGGMERFWTLKYLQQQGITELEATVIKDIPNGAL
VRADALPLVFPVAGQQERGARLRVKLGEIDEIALDVNGTVLERLDTPKTDADGAADDDSG
EDEEVVAGPIAIAVDLSDNEAAPENTPA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtattgtttgaagaagccggcaagtacctcggtggccgcgtgctgtcggaggcc
gaagcatcggcacaagtcgagctcgaaaccggcaagcgcgtcaaggtcaagggcgccaac
attgttctgcgtttcgagaaaccgtcacccaccgagttgatcgcgcaggcgcgcacgctc
gccgccgcgatggacctggaccttgcctgggaatttgcggccgagggcgagttcggcttt
gccgatctcgcggccgactattacagcgacaagccgtcgctcgcccagcaggccgccgca
ctgttcgcgctgttcgaggcgccgcactacttccgccgcgcgggcaaggggcgcttcaag
aaggcgcccgccgaaatcgtgcagcaggcgctggccgccatcgagaagaagaaagccgtt
caggcgcagatcgtcgaatgggccgggcaactggccgagggcgtgtgcccgccgccgatc
cgcgagcagctctacaagatcctgttcaagcccgacaagaacgcccccgaatacaaggct
gtggtcgacgcctcgcgcgccacacagcgcccgccgctcgatctgctggagcgcgcaggc
gccatcgattcgccctaccagttccactggcggcgcttcctgttcgagaacttccccaag
ggcaccggcttcccggcgctcgcggcaccggccatcgtggacgacctgcccgtggccgtt
ggcgtgcaggccttctcgatcgacgattcgcagaccactgaaatcgacgatgcgctctcg
gtacaaggcctgggcagcggcaccgtcaccgtcggcatccacatcgccgcgccggccctg
gcgctgacacccggcagcgccatcgacaacgtggcgcgtgcgcgcatgtcgacggtctac
atgccgggctacaagatcacgatgctgccggacgaggtggtcaacacctacacgctgctc
gaaggcggcgaccgcccggccgtgtcgctctacgcgcgcttcgacgaagccacgctggag
ctgcaaggcacagagaccaagctcgaacgcgtgccgatcgtcgccaacctgcggcacgac
cagctcgatgccgtcgtcacgcagccctggctcgaagacgccgcgttcacgaacgacaac
acgcctgaagccgcagccaacctgcgcgccccgctctccttcctgttccgcctcgcgaag
cagttgaaggcgcagcgcgaagtggtgcgcggcaagccggagaacttcaaccggcccgac
tacaacttccgcctcgtcggcaacgacggcaacgaacccaccggcaacgagcaggtgcag
atcagcacccgccagcgcggcgcgccgctcgacctgatcgtgtccgaagcgatgatcctg
gccaacagcacctggggcagttggctcggcgaactcggcgtgcccgggctctaccgcagc
caggccagcctggcgcccggcatcaaggtgcgcatgggcacgcgcgcgctgccgcatgcg
ggcctgggcgtgaaaagctatgcgtggagcacctcgccgctgcgccgctacaccgacctc
gtgaaccagtggcagatcatcgcggccgcgcgccacggcaagaccgccgcgctggccgcg
cccttcaagccgaaggacgccgacctgttctcgatcctctcgggtttcgacgcggcctat
gcgacctacaacggctaccagggcggcatggaacgcttctggacgctcaagtacctgcag
cagcagggcatcaccgagctggaagccacggtcatcaaggacattcccaacggcgcgctg
gtgcgtgccgatgcgctgccgctggtgttcccggtggccggccagcaggagcgcggtgcg
cgcctgcgcgtgaagctcggcgagatcgacgagattgcgctcgacgtgaacggcaccgtg
ctggaacgcctcgacacgccgaagaccgatgcggacggcgccgccgacgacgacagcggt
gaagacgaagaagtggtggcaggccctatcgccattgccgtcgacctgagcgacaacgag
gccgcgccggaaaacacgccggcatga
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