Variovorax sp. PAMC26660: H7F35_19140
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Entry
H7F35_19140 CDS
T10234
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vaz Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaz03009
]
H7F35_19140
Enzymes [BR:
vaz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
H7F35_19140
Ribosome biogenesis [BR:
vaz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H7F35_19140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
MTS
Methyltr_RsmF_N
Methyltransf_31
Ubie_methyltran
TRM5-TYW2_MTfase
Cons_hypoth95
GCD14
Methyltransf_25
Methyltransf_14
Motif
Other DBs
NCBI-ProteinID:
QNK65338
LinkDB
All DBs
Position
4055037..4056308
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AA seq
423 aa
AA seq
DB search
MHPKALLEATADLVGLVLKFDHPADQVVSRFFRDHREFGPRERATLAETVYTVLRKKLLF
DHLSPSGSGSKERRMAILGFYGPRDFLMSALNDTEKRWLDNCDAVKPEDLLERHRHNLPE
WLVAPLKAQLGDGFWPLVESLQQPAPLDLRVNTLTDKRAEVKAELAKAAIKSVVTPFSPW
GLRIDGKPALTKLDVFARGAVEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGAT
MRNTGRLYAFDTSAHRLDALKPRLARSKLSNVHPAAIAHERDDRVKRLAGKIDRVLVDAP
CSGLGTLRRNPDLKWRQSLKSVEELTVKQTAILQSAARLVKSGGRLVYATCSVLPEENEA
IAEAFAAANPDFEPQDAAELLQGLKVEGFEALCAGGADGRRYLRLWPHRHSTDGFFAAVW
NRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccaaagccctgttggaggccaccgccgatctggtcggccttgtcctgaaattc
gatcacccggccgaccaggtcgtttcgcgctttttccgcgaccatcgcgagttcggcccg
cgcgagcgcgccacgctcgccgagaccgtctacaccgtgcttcgcaagaagctgttgttc
gatcacctctcgccctcgggcagcggctcgaaggaacgccgcatggcgatcctgggtttc
tatggcccgcgcgattttttgatgagcgcactcaacgacacggagaagcgttggctcgac
aactgcgacgccgtcaagccggaagacctgctcgaacgccatcgccacaacctgcccgag
tggctggtggcgccgctcaaggcccagttgggcgacggtttctggccgctggtcgaaagc
ctgcagcagccggcgccgctcgatctgcgcgtcaataccctgacggacaagcgagctgaa
gtgaaggcagagcttgcgaaggctgctatcaaatcggtagtaaccccgttctcgccctgg
ggcttgcgcatcgatggcaagccggcgctgaccaagctggatgtcttcgcccgcggcgcc
gtcgaggtgcaggatgaaggctcgcagctgcttgcgctgctgctggacgccaagcgtggc
gagatggtggtcgacttttgtgccggtgccggcggcaagacgctggccattggcgccacg
atgcgcaacaccggtcgtctctacgccttcgatacctcggcgcaccggctcgatgcgctc
aagccacggctggcgcgcagcaagctctcgaacgtccatccggccgcgattgctcacgag
cgcgacgaccgcgtcaagcgcctggcgggcaagatcgaccgcgtgctggtcgatgcgccc
tgttcggggcttggcacgctgcgccgcaatccagacctgaaatggcgccagtcgctcaaa
tcggtcgaggaattgacggtcaagcagacggccatcctgcaaagtgcggcacggctcgtg
aaatcgggcggccggctggtttacgccacctgcagcgtgttgccagaggaaaacgaggcc
attgccgaagcttttgccgccgccaaccccgatttcgagcctcaggacgctgcggaactg
ctgcaggggctcaaagtagagggtttcgaggcactttgcgctggcggggcggacggcagg
cgctacctgcggctgtggccgcatcgccattccaccgatggcttctttgcggcggtgtgg
aaccgcaaatag
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