Variovorax sp. PAMC26660: H7F35_20170
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Entry
H7F35_20170 CDS
T10234
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz00020
Citrate cycle (TCA cycle)
vaz00190
Oxidative phosphorylation
vaz00650
Butanoate metabolism
vaz00720
Other carbon fixation pathways
vaz01100
Metabolic pathways
vaz01110
Biosynthesis of secondary metabolites
vaz01120
Microbial metabolism in diverse environments
vaz01200
Carbon metabolism
Module
vaz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vaz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vaz_M00149
Succinate dehydrogenase, prokaryotes
vaz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
H7F35_20170
00650 Butanoate metabolism
H7F35_20170
09102 Energy metabolism
00190 Oxidative phosphorylation
H7F35_20170
00720 Other carbon fixation pathways
H7F35_20170
Enzymes [BR:
vaz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
H7F35_20170
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
FAD_oxidored
Pyr_redox_3
ThiF
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QNK65529
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Position
complement(4307423..4309231)
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AA seq
602 aa
AA seq
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MTYTKEQITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDDEG
DVVGVTALEMETGDLHILQAKTVLLATGGAGRIFGASTNAFINTGDGLGMAARSGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYIHMKLDHLGADTIHKRLPSVYEIGINFANVDVTKEPIPVVPTIHYQ
MGGIPTNINGQVVIQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVQFNDKLKEHKALPTNAADRTLQRLNELEDSTAGEYAQDVAGEIRAVMQQHAAVFRK
QASMDEGVVKIAAVRERVKAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKEC
RGAHTVEDYERPSDDPVAPLGRDDANWMKHTLWYSQDNRLSYKPVKLQPLTVASVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacctacacaaaagaacaaatcaccaagcgcaagttcgacgtcgtgatcgtcggcgcc
ggcggctccggcatgcgcgcatcgctgcaactcgcacgtgccggcctcaatgtggccgtg
ctctccaaggtgttcccgacccgttcgcacaccgtcgcggctcaaggtggcgtgggcgct
tcgctcggcaacatgagcgaagacaactggcactaccacttctacgacacgatcaagggt
tccgactggctcggcgaccaggacgcaatcgagttcatgtgccgcgaagcaccgaaggtc
gtgtacgagctcgaacacttcggcatgccgttcgaccgcaaccccgatggcaccatctac
cagcgtccgttcggcggccacacggccaactacggcgagaagcccgtgcagcgcgcctgc
gccgcggccgaccgcaccggccatgcgatgctgcacacgctctaccaaaagaacgtcgaa
gcccgcacccagttttttgtcgaatggatggcgctcgacctcatccgtgacgacgaaggc
gacgtggtcggcgtgaccgccctcgagatggaaaccggcgacctgcacatcctgcaggcc
aagaccgtgctgctggccaccggcggtgcgggccgcatcttcggcgcgtccaccaacgcc
ttcatcaacaccggcgacggcctgggcatggccgcgcgctcgggcatcccgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgctgaccgaa
ggctgccgcggcgaaggcgccatcctgctcaacagcaacggcgaacgcttcatggagcgc
tacgcgcccacgctgaaggacctggcaccgcgcgacttcgtgtcgcgttcgatggaccag
gaaatcaaggaaggccgtggctgtggtcccaacaaggactacatccacatgaagctggac
cacctcggggccgacaccatccacaagcggctgccttcggtctacgagatcggcatcaac
ttcgccaacgtcgacgtcaccaaggaaccgattccggtggtgccgaccatccactaccag
atgggcggcatcccgaccaacatcaacggccaggtcgtcatccagaagggtgaagacaac
agcgccgtggtgaacggcctctacgccgtgggcgaatgctcctgcgtgagcgtgcacggc
gccaaccgcctgggcaccaactcgctgctcgacctgctggtgttcggccgcgcggcgggc
aaccacatcgtccagttcaacgacaagctcaaggaacacaaggcgctgccgaccaacgct
gccgaccgcacgctgcaacgcctgaacgaactcgaagacagcaccgccggcgaatacgcg
caggacgtggccggcgagatccgcgccgtcatgcagcagcacgccgccgtgttccgcaag
caggcctcgatggacgaaggcgtggtcaagatcgccgccgtgcgcgagcgcgtcaaggcg
atcggcctgaaggacaagtccaaggtgttcaacaccgcccgcatcgaagcgctggaagtc
gacaacctgatcgaagtggcgcaggccaccatggtctctgccgccgcccgcaaggagtgc
cgcggcgcccacacggtggaagactacgagcgcccctcggacgacccggtcgcaccgctg
ggccgcgacgacgccaactggatgaagcacacgctctggtacagccaggacaaccgcctc
tcgtacaagccggtcaagctgcaacccctgacggtcgcatcggtgcccccgaaggtccgg
acattctaa
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