Variovorax sp. PAMC26660: H7F35_21265
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Entry
H7F35_21265 CDS
T10234
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
H7F35_21265 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vaz03011
]
H7F35_21265 (rpsA)
Ribosome [BR:
vaz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
H7F35_21265 (rpsA)
Bacteria
H7F35_21265 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
GCS
SH3_9
Motif
Other DBs
NCBI-ProteinID:
QNK65737
LinkDB
All DBs
Position
complement(4550711..4552399)
Genome browser
AA seq
562 aa
AA seq
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MSESFADLFEESLKRSEMRTGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGEL
EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNETGETAVRNYKKGQEVEALVL
AVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDILGYLRA
SEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMANLSQQSAR
ENAGTTSLGALLRAKLDNSDNK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgacctattcgaagagtccctgaagcgttccgaaatgcgcacc
ggcgaggtcatcacggccgaagtcgtgcgcgtcgagcacaaccacgtcgtcgtcaacgcc
ggtctgaagtccgaagcgtatgtgccgatcgaagagttcaagaacgacaagggcgaactc
gaagtccaggccggcgatttcgtttccgttgccatcggcagcgttgaaaacggctacggc
gacaccatcctctcgcgcgacaccgccaagcgtctggcttcgtggctcgccctcgagaag
gccctggaatcgggcgacttcgtcaccggcaccaccagcggcaaggtcaagggcggtctc
accgtcctggtcaacggcatccgcgcattcctgccgggttcgctgatcgacacgcgtccg
atcaaggacctgaccccgtacgaaaacaagaccctcgaattcaaggtcatcaagctcgac
cgcaagcgcaacaacgtcgtgctgtcgcgccgtgcagtggtcgaagccagcatgggcgaa
gaacgcgccaagctgatggaaaccctgaaggaaggcgctgttgtccgcggcgtcgtcaag
aacatcaccgaatacggtgcgttcgttgacctcggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgtgttcgccacccgagcgaagtcgttcaggccggccaggaa
atcaccgccaagatcctcaagttcgacaccgaaaagaaccgtgtctcgctgggtctcaag
caaatgggtgatgacccgtggatgggcgtttcgcgccgctacccgcaatcgacccgcctg
ttcggcaaggtcacgaacattgccgactacggcgcgttcgtcgaactcgaacccggcatc
gaaggcctggtgcacgtctccgaaatggactggaccaacaagaacatcgctccgaacaag
atcgtctcgctgggcgacgaagtcgaagtcatggttctggaaatcgacgaagacaagcgc
cgcatcagcctgggcatgaagcagtgcaaggccaacccgtggcaagagttcgcgcaaaac
accaagcgcggcgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggtctggctgccggcatcgacggcctggttcacctgtcggacctctcgtggaacgaa
accggcgaaaccgccgttcgcaactacaagaagggccaggaagtcgaagcgctcgtgctg
gctgtcgacgtcgaccgcgaacgcatcagcctgggcatcaagcagctggacagcgacccg
ttcaccacgttcaccaccgtgaacgacaagggccagatcgtgaccggcaaggtcaagacc
gtggacgcccgcggcgctgaaatcgacctcggcgaagacatcctcggctaccttcgcgcc
agcgaaatctctcgcgaccgcgtggaagatgctcgcaacgtgctgaaggaaggcgacgaa
gtcaccgccatcgtcgtgaatgtggatcgcaagacccgcaacatccagctgtcgatcaag
cagaaggacatggtcgacgaacaaggcgccatggccaacctgagccagcagtcggcacgc
gaaaacgcgggcacgacgagcctgggcgccctgctgcgcgccaagctcgacaacagcgac
aacaagtaa
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