Variovorax sp. PAMC26660: H7F35_21960
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Entry
H7F35_21960 CDS
T10234
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vaz Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaz03009
]
H7F35_21960
Enzymes [BR:
vaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
H7F35_21960
Ribosome biogenesis [BR:
vaz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H7F35_21960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
zf-C2H2_fungi_2
Motif
Other DBs
NCBI-ProteinID:
QNK65866
LinkDB
All DBs
Position
4679430..4680170
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AA seq
246 aa
AA seq
DB search
MHLQDILYTQGFGTRRVCAGLVQQGLVTIAGAVVDDPFEDLDPEGLLYTVQGTEWAYHEK
AYLMLHKPAGTECSQKPSTYPSIYTLLPSPLRLRPNKGAVQGVQAIGRLDQDTTGLLLLT
DDGQFIHKMGSPKHHVPKVYEVTAKHEVDETQIAKLLAGVVLDDDPKPVRAAACESDSPL
HLRLTLTEGKYHQVKRMLAAVGNRVEGLHRSRIGGLVLPEDLAPGQWRWLTSEQVAALRA
PSKPSK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaagacatcctctatacccaaggcttcggcacacggcgcgtgtgcgcgggc
ctggtccagcaaggcctcgtgaccatcgcaggcgccgtggtggacgaccctttcgaagac
ctcgaccccgaaggcctgctctacaccgtccagggcaccgagtgggcgtaccacgagaag
gcctacctgatgctgcacaagccggctggcaccgagtgttcgcaaaagccctcgacctac
ccgagcatctacacgctgctgccgtcgccgctgcggctgcgccccaacaagggcgcggtg
cagggcgtgcaggccatcggccggctcgaccaggacaccaccggcctgctgctgctgacc
gacgacggccagttcatccacaagatgggctcgcccaagcatcacgtgcccaaggtctac
gaggtgacagccaagcacgaggtggacgaaacgcagatcgcgaagctgctggctggcgtc
gtgctcgacgacgacccgaagccggtgcgcgcggccgcctgcgagtcggacagcccgctg
cacctgcggctcacgctgaccgagggcaagtaccaccaggtcaagcgcatgctggccgcg
gtcggcaaccgggtcgaaggcctgcaccgctcgcgcatcggcggcctcgtgctgcctgaa
gacctcgcgccggggcagtggcgctggctgaccagtgaacaggtcgcggcgctgcgcgcg
ccatccaaaccatccaaatag
DBGET
integrated database retrieval system
