Variovorax sp. PAMC26660: H7F35_23785
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Entry
H7F35_23785 CDS
T10234
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz00541
Biosynthesis of various nucleotide sugars
vaz01100
Metabolic pathways
vaz01250
Biosynthesis of nucleotide sugars
Module
vaz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H7F35_23785 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vaz01005
]
H7F35_23785 (kdsA)
Enzymes [BR:
vaz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
H7F35_23785 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vaz01005
]
Lipid A
H7F35_23785 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QNK66197
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Position
complement(5038547..5039404)
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AA seq
285 aa
AA seq
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MKLCGFDIGLDQPFFLIAGPCVVESEQLQMDTAGTLKEITSALGIPFIFKSSFDKANRSS
GTSFRGPGRDKGLEILAKVKRELGLPVLTDVHTLEDITEAAKVVDVLQTPAFLCRQTDFI
YAAAQSGKPVNIKKGQFLAPHDMKNVIDKARAAAKEAGLDEDSFMACERGASFGYNNLVS
DMRSLAIMRETKAPVVFDATHSVQLPGGQGTTSGGQREMVPVLSRAAVAVGVAGLFMETH
PDPAHAMSDGPNAVPLKHMKALLETLLALDRVTKKNAFLEDSFQA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctgcggattcgacatcgggctcgaccagcccttcttcctgatcgccggcccc
tgcgtggtcgaatccgagcagctgcagatggacaccgccggcacgctgaaggaaatcacc
tcggcgctcggcattccgttcatcttcaagagcagcttcgacaaggccaaccgctcgtcg
ggcacgagctttcgcggccccggccgcgacaagggcctcgaaatcctcgcgaaggtcaag
cgcgaactcggcctgcccgtgctgaccgacgtgcacaccctcgaagacatcaccgaggcc
gccaaggtggtcgacgtgctgcagacgcccgccttcctgtgccgccagaccgacttcatc
tacgccgcggcgcagtcgggcaagccggtcaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcgcgtgctgctgcaaaggaagccggcctcgac
gaagacagcttcatggcctgcgaacgcggcgccagcttcggctacaacaacctcgtatcg
gacatgcgttcgctcgcgatcatgcgcgagacgaaagcgcccgtcgtgttcgatgcgacc
cactcggtgcagttgccgggcggccagggcacgacctcgggcggccagcgcgaaatggtg
ccggtgctctcgcgcgcggccgtggcggtcggcgtggcgggcctgttcatggaaacccat
cccgaccccgcacacgccatgagcgacggccccaacgccgtgccgctcaagcacatgaag
gccctgctcgaaacgctgctggcgctcgaccgggtcaccaagaaaaacgctttcctagag
gacagttttcaagcatga
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