Variovorax sp. PAMC26660: H7F35_24690
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Entry
H7F35_24690 CDS
T10234
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H7F35_24690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_24690
Transporters [BR:
vaz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H7F35_24690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
CitMHS
DcuC
Tom6
Motif
Other DBs
NCBI-ProteinID:
QNK66370
LinkDB
All DBs
Position
complement(5231135..5232412)
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AA seq
425 aa
AA seq
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MSVMMVATMVLCFALSVSVAVSIGLASILGIQVSNANMLISVKEMFNSINKFPLAAIPFF
ILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAIL
IPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILIS
LALMLFVWVYCKWKGWGKTDGEGRMPFGRALWQAGWALLMPVIILGGIYGGVFTPTEASA
VAVFYALVVGMVIYREIKPKDLYTILRKSVMSSAVIMFIIANAGLFAFLITRAGVPDAIG
HWLQEVLKSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFGLIMV
VNLALGMITPPFGVNLFAACTVARISLDRIVKHLVPFVLVIMACLMVITYVPWVSLALRD
LVYAK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatgatggtcgcaacgatggtgctgtgttttgcactgtcggtctcggtggcg
gtttccatcgggctggcgtcgatcctgggcatccaggtgtcgaacgccaacatgctgatc
tccgtgaaggagatgttcaattcgatcaacaagtttccgctggcggccattccgttcttc
atcctggccggcaacctgatggaaaccggcggcatctcgcgccggctggtggagttcgcc
aagagcatcgtgggcggtgtgcagggcggcctgccaatgacctgcgtgctcacctgcatg
atcttcgcggcggtctcgggctcgtcggtggccaccaccttcgcgatcggcgccatcctg
atcccggcgctcatcaagcacggctaccccacctcgtacgcagcggccctgcaggccacg
agcgcggagctgggcgtgatcattccgccgtcgatcccgatgatcctctacggcgtgagc
gccgaagtgtccatcggcgagctgttcattgcgggcttcggccccggcatcctgatcagc
ctggcgttgatgctgttcgtgtgggtctactgcaagtggaagggctggggcaagaccgac
ggcgaaggccgcatgcccttcggccgcgcgctgtggcaggccggctgggcgctgttgatg
ccggtgatcatccttggcggcatctacggcggcgtcttcacgccgaccgaggcctccgcc
gtggcggtgttctacgcgctggtggtgggcatggtgatctaccgcgagatcaagcccaag
gacctgtacacgatcttgcgcaagtcggtgatgtcgtcggcggtgatcatgttcatcatc
gccaacgcggggttgttcgcgttcctgatcacccgcgcgggcgtgcccgacgccattggc
cactggctgcaggaagtgctgaagtcgccggcgatgttcctgctgggcgtgaacgcggcg
ctgttcgtgatcggcatgttcatcgagaccagcgcggcgatcatcgtgctcgcgccgatc
ctggcgccggtggcggtgcacttcggcatcgacccggtgcacttcgggctgatcatggtg
gtgaacctggccctgggcatgatcacgccgcccttcggcgtgaacctgttcgcggcctgc
accgtggcgcgcatatcgctggaccgcatcgtcaagcacctcgtgcctttcgtgctggtg
atcatggcgtgcctgatggtgatcacctacgtgccgtgggtctcgctggcgctgcgcgac
ctggtctacgccaagtag
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