KEGG   Variovorax sp. PAMC26660: H7F35_24820
Entry
H7F35_24820       CDS       T10234                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_24820 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_24820 (tssI)
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_24820 (tssI)
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Gp44-like_2nd
Other DBs
NCBI-ProteinID: QNK66395
LinkDB
Position
5256695..5259586
AA seq 963 aa
MSALSASPTRTLDISSPAIPVILGRPALEPVRLSGHEGLNSLFEYGLLLKTPDALNLGAS
SAMDFDLDSFIGREIICSIQLDGAGQFLPGVAGQSIDHIGAGVRQINAMICAAEVWGEEG
RHVQYKLTLRPWLHLATLTTDCKIFQNQTVVQILDELLSGYDFPVDKRLIEAYPVRDYQV
QLNESDFAFFERLTQSWGISYFFEHSEGKHRLVLIDNMGAYQKNDSAAYQQVEYHAPGWK
VDAEYVHSFVPHNQITSGRYASRDYDYTRPKADLGIGRKDPRPTGQADGEVYQWHEGSAG
GSHYAQPRAGSGEANDPHGEGHQLALLRMQALRTHGARARASGNLRGMVPGCSFELQKHP
RQKANAEYLILETRFLIEDVAQDSQIGDASPSRKQQWKVEVDFIAHPMVEPLRPALVRVK
PFTRGPQSALVVGPAGQNIWTDELGRIKVQFPWDRIGQKNQHSTCWIRVTSPWAGNQLGG
IQIPRIGQEVIVNFIGGDPDLPICTGRAYNQANLPPWALPGQQALSGFRSRELTEEGGNS
AAGRSNHLAMDDTAGKIQVQLKSDHQHSQLSLGHITRIEDNAGRKDPRGEGFELRTDGHG
VLRAQDGMLITTEARGNAAKHAKDLGETLARLTTGRDQHESLSESAQQAEAHVKGDQDEV
TKALKAQNDAIKGGTGDAKTDNFPELAEPHLVLASPAGIQTSTAQSTHIAGFEHNALTSG
GHTSISAARSFLVSVKEAIRLYAYEAVIKLVAAKNNIDIVALQKNIHILAKLDIKLSANK
ISIMAKEQLELGGGGSYSVYTSAGITHMTPGTWVEHAGVHAYQGPDNKPTTLRDGASELK
LKPPEGQLRFALQHLPDQSPMLFARQPYTLYKNGAQVAQGILDGYGQVTIDEAEKGAVYK
VKLTNGTVHDVPVAPDRMESDSAKSAHPEHHLSNQGYRADGESTNQRKAQKERGSADRKD
SPQ
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgtccgcactcagtgcttcgccaacgcgcacgctcgacatcagcagccccgccattccg
gtgatcctgggccgcccggcgttggagccggttcggctgtcggggcatgaagggctcaac
agcctgttcgagtacgggctgcttctgaagacccccgatgccctgaatcttggcgccagc
agtgcgatggacttcgatctggacagcttcatcgggcgcgagatcatttgctcgatccag
ctcgatggtgcgggccagttccttcctggcgttgcgggacagtccatcgaccacattggc
gcaggcgtgcgccagatcaacgccatgatctgtgccgccgaggtctggggcgaagaaggc
cgccacgttcagtacaagctcacgctgcgcccctggctgcacctggcaacgctcaccacc
gactgcaagatcttccagaaccagaccgtggttcagatcctcgatgagcttctttccggc
tatgacttcccggtggacaagcgcctgatcgaggcctatccggtgcgcgattaccaggtc
cagctcaacgaaagcgacttcgcgttcttcgagcgcctgacgcaaagctggggtatcagc
tacttcttcgagcacagcgaaggcaagcaccgcctggttctcatcgacaacatgggggcg
taccagaagaacgacagcgccgcctatcagcaggtcgaataccacgcaccgggctggaag
gtggatgccgagtacgtgcacagtttcgttccgcacaaccagatcacgagcggcaggtac
gccagccgcgactacgactacacccggcccaaggccgatctgggcattggccgcaaagac
ccgcgccctaccgggcaggccgacggcgaggtgtaccagtggcatgaaggcagcgcaggt
ggcagccactacgcgcagccccgcgctggttctggtgaggcgaacgatccgcatggcgaa
ggccatcagttggcgcttcttcgcatgcaggccctgcgcacccatggcgccagggcgcgg
gccagcggcaatctgcgtggcatggtgcccgggtgcagtttcgagcttcagaagcacccg
cgccagaaggccaatgccgaatacctgatcctggagacccgcttcctgatcgaagacgtc
gcgcaggacagccagatcggtgacgcttcccccagccgcaagcagcaatggaaggtggaa
gtcgacttcatcgcgcacccgatggtcgagccgctgcgcccggcactcgtgcgggtcaag
cccttcactcgtggccctcaatccgcgctggtggtcggccccgccggccagaacatctgg
accgatgagctgggccgcatcaaggtgcagttcccctgggaccgcatcggccagaagaac
cagcacagcacctgctggatacgggtgaccagtccgtgggcaggcaatcagttgggcggc
atccagatcccgcgcatcggccaggaggtgatcgtcaactttatcggcggggacccggac
ctgccgatctgcacggggcgcgcctacaaccaggcgaacctgccgccgtgggcgctgccg
ggtcagcaggcgttgtcgggcttcaggagccgcgagctgaccgaggaaggtggcaacagt
gcagcggggcgcagcaaccaccttgcgatggacgacacggccgggaagatccaggttcag
ctcaagagcgaccaccagcacagccaactgagcctggggcacatcacacgcatcgaggac
aacgcgggacgcaaggacccgcggggcgagggcttcgaattgcgcactgacggccacggt
gttctacgggcgcaggacgggatgctcattaccaccgaggcgcgtggcaatgccgccaaa
cacgccaaggaccttggggagaccctggcccggctcaccaccgggcgcgatcagcacgag
agcctgtccgaatcagcccagcaggccgaggcacacgtcaagggcgatcaggatgaggtg
accaaggcgctcaaggcgcagaacgatgcgatcaagggtgggaccggcgatgcgaagacg
gacaacttcccggagttggccgagccgcatctggtgctcgccagcccggcgggcatccag
accagcacggcgcaatcgacgcacatcgccggcttcgagcacaacgcattgaccagcggc
gggcacaccagcatctcggcggccaggagcttcttggtgagcgtgaaagaggcgatccgg
ctgtatgcctatgaggcggtcatcaagctggtggcggccaaaaacaacatcgacatcgtg
gcactgcagaagaacatccacattctggccaagctcgatatcaagctgagcgccaacaag
atcagcatcatggccaaggagcagttggagctgggcgggggcggcagctacagcgtctac
accagtgcgggcatcacgcacatgacgccgggtacatgggtcgagcatgcgggcgtgcac
gcgtaccaggggccggacaacaagcctacaacactgcgggatggcgccagcgaactcaag
ctcaagccgccagaaggtcagcttcgcttcgcccttcagcacctgccggaccaatcgccc
atgttgttcgctcgtcagccttacacgctctacaagaacggcgcccaggtagcgcaaggc
attcttgacggatacgggcaagtcaccatcgacgaggccgaaaagggtgccgtctacaaa
gtcaagctgacgaacggcaccgttcacgacgtgccagtggccccggatcggatggagtcc
gattcggccaagtcggcgcatcctgaacaccacctttccaaccagggctaccgtgcggac
ggcgaaagtacgaaccagcgcaaggctcaaaaagaacgtggctctgcagaccggaaggac
tccccgcaatga

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