Variovorax sp. PAMC26660: H7F35_26265
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Entry
H7F35_26265 CDS
T10234
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7F35_26265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaz03400
]
H7F35_26265
Enzymes [BR:
vaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H7F35_26265
DNA repair and recombination proteins [BR:
vaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7F35_26265
Prokaryotic type
H7F35_26265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7528
Motif
Other DBs
NCBI-ProteinID:
QNK71729
LinkDB
All DBs
Position
complement(5579764..5580591)
Genome browser
AA seq
275 aa
AA seq
DB search
MQETLTDWPADLPDAWRAALGDVQLDFDGVDAALALEAWEPIFPARKGRRLPGMPAGAHM
LKAFDSVAPSQVRCVVLGQDPYPSIDIATGRAFEVGNVAEWRELDKMFTKSIRAWVQMVA
EARTGNARYGGAFANWPHTLQAIESGALPFETPETLSDRWCEQGVLLLNTSFTLSRFQVG
IDPHQSHGHLVLWKPLIDAVLNHLLERDEPLVFMGFGASAAQALQSAGVVEGRRHNVACI
LREHPASADAVLALPNPFALCNAYLAEMGGAPLNW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ctgcaagaaacactgacggactggcccgccgatctgcccgatgcctggcgcgccgcgctg
ggtgatgtgcaactggatttcgacggtgtcgacgcagccctggcgctcgaagcgtgggag
cctatcttcccggcgcgaaagggccggcgcctgcccggcatgcctgccggcgcgcacatg
ctcaaggccttcgacagcgtggcgccttcgcaggtgcgctgcgtggtgctggggcaagac
ccgtatccgtcgatcgacatcgccaccggccgcgccttcgaggtcggcaacgtggccgaa
tggcgcgagctcgacaagatgttcaccaagagcatccgcgcctgggtgcagatggtggcc
gaggcacgcaccggcaatgcccgctacggcggcgcattcgccaactggccgcacacgctg
caggcgatcgaatcgggcgcgctgcccttcgagacacccgagaccttgagcgaccgctgg
tgcgaacaaggcgtgctgctgctcaacacctccttcacgctcagccgcttccaggtgggc
atcgatccgcaccagtcgcacggccatctggtgctgtggaagccgctgatcgatgcagtg
ctgaaccacctgctggaacgcgacgagccattggtcttcatgggcttcggcgcctccgcc
gcgcaggccctgcaatcggccggcgtggtcgaagggcgtcgccacaacgtcgcctgcatc
ctgcgcgagcaccccgccagcgccgatgccgtgctcgccctgcccaacccctttgcactg
tgcaacgcctatctcgcggagatgggcggcgcccccctgaactggtga
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