Variovorax sp. PAMC26660: H7F35_27415
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Entry
H7F35_27415 CDS
T10234
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03030
DNA replication
vaz03430
Mismatch repair
vaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H7F35_27415 (dnaX)
03430 Mismatch repair
H7F35_27415 (dnaX)
03440 Homologous recombination
H7F35_27415 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaz03032
]
H7F35_27415 (dnaX)
03400 DNA repair and recombination proteins [BR:
vaz03400
]
H7F35_27415 (dnaX)
Enzymes [BR:
vaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H7F35_27415 (dnaX)
DNA replication proteins [BR:
vaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H7F35_27415 (dnaX)
DNA repair and recombination proteins [BR:
vaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H7F35_27415 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_18
AAA_14
Rad17
AAA_5
AAA_30
AAA_16
AAA_19
nSTAND3
SKI
AAA_assoc_2
TsaE
AAA_2
Herpes_Helicase
AAA_28
Torsin
Motif
Other DBs
NCBI-ProteinID:
QNK66867
LinkDB
All DBs
Position
5809570..5811450
Genome browser
AA seq
626 aa
AA seq
DB search
MSYLVLARKFRPKTFGEMVGQGHVVQALENALTTQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGLGGITATPCGVCQACRDIDSGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETILEHLTSVLQTEQVPAEPQALRLLARAARGSMRDALSLTDQAIAFGNGELIET
GVRQMLGSVDRGHVFKLIEALAQGDGKTVVDTSEALRRDGMSAASTLEEMTAVLQAMAVL
QAVPSRAESADSATDPDAADTTRLASLMPADETQLLYSLCLHGRGELGLAPDEYAALTMV
LLRLLAFKPSNAAASTASPEKKTLNEAAVAAPAAPARIAAPVPAPVPVARPEAESPPVAP
APTPPVPAPAVAQQPASVPAGHRLSVVDEPLRQAAPRVEATTDVPAKVVGVPIRVQPPPG
ARDAPRGEESRGTFTPIPASEDGDFWFVTVTQLVASEAIAALARELALQSQLVARDTDQW
MLRIERETLNQPSSREKLTAALNALGHDVKLVIEIGGVVDSPARRNKQAADERQRVAEEA
IHNDPEVQALMRDFDAKIVPGTLKPA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgtgctcgctcgcaagttccgtccgaaaaccttcggtgagatggtcggc
caggggcatgtggtgcaggcgctcgagaacgcgttgaccacgcagcgcctgcatcacgcc
tatcttttcaccggcacgcggggcgtgggcaagaccacggtctcgcgcatcctggcgaag
tcgctcaactgccagggcccggacggactgggtggcatcaccgccacgccgtgtggcgtc
tgccaggcctgccgcgatatcgattccggccgcttcgtcgactacaccgaactcgatgcg
gcttcaaaccgcggcgtcgacgaagtgcaatcgttgctagaacaagccgtctacaaaccg
gtgcaggggcgcttcaaggtcttcatgatcgacgaagtgcacatgctcaccaacaccgcg
ttcaacgcgatgttgaagacgctcgaagagccgcccgagtacctcaagttcgtgctcgcg
accaccgatccgcagaaggtgcccgttacggtgttgtcgcgttgcctgcagttcaatctg
cggccgatggcaccagagacgatcctcgagcacctgaccagcgtgctgcaaaccgagcaa
gtacctgccgagccgcaggcattgcgcctcctggcgcgggccgcgcgcggttcgatgcgc
gatgcgttgtcgctcactgaccaggccatcgctttcggcaatggcgaactgatcgaaacc
ggcgtgcgccagatgctcggcagcgtcgaccgcggccatgtgttcaagctgatcgaagcg
ctggcgcagggcgacggcaagacggtggtcgacacttcagaggcgctgcgccgtgacggc
atgtccgccgcctccacgctcgaagaaatgacggcggtgctgcaggccatggccgtgctt
caagccgtcccctcgcgggcggagtcggccgattcggccaccgaccccgacgcggcagac
accacgcgccttgcatcgctgatgccagccgacgaaacgcaattgctctacagcctgtgc
ctgcacggccgtggcgagctgggcctggcgcccgatgaatacgcggcgctgaccatggtg
ctgctgcggctgttggccttcaagccttccaacgcggctgcctcgacagcttccccggaa
aaaaaaactctgaatgaagccgcggtcgcggcgccggctgctccggcgcgtatcgcggcc
cctgttccggcacctgtgccggtggctcgccctgaagccgaatcaccaccggtcgcccca
gcgccgactcccccagtcccggctccggcggtcgcgcaacaacctgcttcggtcccggcc
gggcatcgcctctcggtcgtcgacgagccgttgcggcaagccgcgccccgtgtcgaggcc
acgacggatgtacctgccaaggtcgttggcgtcccgatccgcgtgcagccgccgcccggc
gcacgcgatgcacctcgcggcgaagagtcgcgcggcactttcactcccattccggccagt
gaagacggtgatttctggttcgtcacggttactcaactggtcgcctcggaagccatcgcg
gccctggcccgcgagttggccctgcagtcgcaactggtggcgcgcgacaccgaccaatgg
atgctgcgcatcgagcgcgaaacgctcaaccagccttccagccgcgaaaaactgaccgcc
gcactgaatgcgcttggccatgacgtcaagctggtcatcgagatcggcggcgtggtcgac
agccccgcgcgacgcaacaagcaggccgccgacgagcgccagcgcgtggccgaggaggcc
atccacaacgaccccgaagtgcaggcgctgatgcgcgacttcgatgcgaagatcgtgccc
ggaacgctgaaaccggcctga
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