Variovorax sp. PAMC26660: H7F35_28020
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Entry
H7F35_28020 CDS
T10234
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F35_28020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_28020
Transporters [BR:
vaz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
H7F35_28020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Usp38-like_N
Motif
Other DBs
NCBI-ProteinID:
QNK66977
UniProt:
A0A7G8VFT4
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All DBs
Position
5931952..5933541
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AA seq
529 aa
AA seq
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MLRRLLTATLLAAGLLQVSIASAETVRWARSADPATLDPHAVNTGTNFGLLHQIYEPLVV
RGADSKLQPGLAASWKLTADATVWEFKLRPGVKFHDGSLLTADDVVFSLKRAQAPTSALK
SLLTSVAEVTKIDPLTVQVKTKGPNLIFPNNLTNIFILSEAWAKANKAEQSQDVASKTEN
FSTRNENGTGPYVLASREVDTRTVLKQFPQYWGRGQFPLEVTELIYVPIKSPATRVAALL
SGEVDFVQDLPAQDVGRLKADKRLRVTEGPENRSIFLGLNVGAKELKYSDVKGRNPLADP
RVREAIGLAIDRDAIKTAVMRGLSNPSGIIAPPFVHGYEKSLAAYPKANAAQAKKLLAEA
GYPNGFSITLHTPNDRYVNDEAISTAVSGFLGRIGIKTTVAARPIALHSTAINTADTDFY
LFGWGVPTYDSAYIFDYLVYTRGKDGRGPTNATGYSNPEVDAQIASLASESDKGKRDATI
KSIWQTVQKERIYIALHDQVLNFASTPRLDIPVSPDGTVYFKNVKVAKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctccgacgacttctgaccgcgaccttgctggccgccggcctgctgcaggtgtccatc
gcttccgccgaaaccgtgcgctgggcgcgcagcgccgacccggccacgctcgatccgcat
gcggtcaacaccggcaccaacttcggcctgctgcaccagatctacgaaccgctggtcgtg
cgcggtgccgacagcaagctgcaacccggcctcgccgcctcgtggaagctcacggccgac
gcaacggtgtgggagttcaagctgcgccccggcgtcaagttccatgacggttcgctgctc
acggccgacgacgtggtgttctcgctcaagcgggcacaggcgccgacgtcggcgctgaaa
tcgctgctgacgtcggtggccgaggtgacgaagatcgatccgctcacggtccaggtcaag
accaaggggccgaacctgatctttccgaacaacctcacgaacatcttcatcctgagcgaa
gcatgggcgaaggcgaacaaggccgagcagtcgcaggacgtggcgagcaagaccgagaac
ttctccacccgcaacgaaaacggcaccggcccctatgtgctggcatcgcgcgaggtcgat
acgcgcacggtgctcaagcagttcccgcagtactggggccgtggccagtttccgctggag
gtgaccgagctgatctacgtgccgatcaagtcgcccgccacgcgcgtggccgcgctgctg
tcgggcgaggtcgatttcgtgcaggacctgcccgcgcaggacgtgggccggctcaaggcc
gacaagcgcttgcgcgtgaccgaagggcccgagaaccggtcgatcttcctgggtctgaac
gtgggcgcgaaggagctcaagtactcggacgtgaagggccgcaacccgctggccgacccc
cgcgtgcgcgaagccatcggcctggccatcgaccgcgacgccatcaagacggccgtgatg
cgcggcctgtcgaacccctcgggcatcatcgcgccgccgttcgtgcacggctatgaaaag
agccttgcggcctacccgaaggccaatgccgcccaggccaagaagctgctggccgaggcc
ggctatccgaacggcttttcgatcacgctgcacacgccgaacgaccgctacgtgaacgac
gaggccatcagcacggcggtgtcgggcttcctcgggcgcatcggcatcaagaccacggtg
gcggcacgcccgatcgcgctgcacagcactgccatcaacacggccgacaccgacttctat
ttgttcggctggggcgtgcccacctacgactcggcctacatcttcgattacctggtctac
acgcgcggcaaggacggtcgcggcccgaccaacgccaccggctacagcaaccccgaggtc
gatgcgcagatcgcatcgctggcctccgaaagcgacaagggcaagcgcgacgccaccatc
aagagcatctggcagacggtgcagaaagagcgcatctacatcgcgctgcacgaccaggtg
ctcaacttcgcatcgactccgcggctcgacatcccggtcagccccgatggcactgtctat
ttcaagaacgtgaaggtggcgaagaagtaa
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