KEGG   Variovorax sp. PAMC26660: H7F35_28805
Entry
H7F35_28805       CDS       T10234                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_28805 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_28805 (tssM)
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_28805 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical LPG_synthase_TM DUF3007 DUF4381
Other DBs
NCBI-ProteinID: QNK67121
UniProt: A0A7G8VG78
LinkDB
Position
6126926..6130750
AA seq 1274 aa
MRRFFSFLVDPRTLSVIGAIALGAFLLIGAQTLEIGAIWAVAIFAVLLLLWLLVWFIRRM
RTRAANRKLGDMLEEQADAAVRDSDPERKAEIDELRARMVEAVKTIKTSKIGQMSGSEAL
YELPWYMVIGNPAAGKSSAILNSGLQFPFADKGNAVIQGIGGTRNCDWFFTTEGIVLDTA
GRYSIHQEDRKEWFGFLDLLKKYRPKAPINGIIITASIPELIGSRPDFAIQLAKNLRQRM
QELTERLEVFAPVYVMFTKADLITGFAEFFGDSDKMERDRVWGASLPYDGDEKQDAVALF
DKRFDELYLGLKEISVSHFATNRSSDPSPELLIFPLEFAAIKPALRAFLATLFESNPFQH
KPVFRGFYFTSALQEGTMRSLSTERIAKRFGLTLNNAATKSKEIYSQNGFFLRDLFSKVI
FADKKTVRQFSSPVKSRLRYLSFFAFVAVLGLLLGGWTWSYLGNKQLVENVQADLDKVVK
LQASDNGLRTRFEALGILQDRIEQLEKFRNDRPLSLSLGLYQGNQLEDKLVAEYYGGVKQ
LMLVPVSDNLQAFLREVNAHPERLKRADAAGNPAAPVAVSAATPAVPPVAEGGGLYAGSS
PADVQDAYNALKTYLMLSDKRQVETAHLTDQISRFWRGWLESNRGDMPRAAVIRDAERMI
TFYLRRVGDDNWPALADTNLALVEQTRENLRRVVRGMPARERVYAEIKARASTRFAPMTV
ARILGATAGSTESEGSIAGSIAISGAFTREAWQQYVDDAIRDAANKETSSKDWVLNVAGN
DDLTLEGSPEQIRKTLATMYKLEYAKEWQRFLQGIAVKDMGSFEQAVVAMNLLGDPQNSP
IRKVFDTVYEQTSWDNPSLVNAGLQQARTGAFNWIKRLFSRATPSQLNVTIDASGNPTEI
PMGPIGKEFAGVARLVVERDNTSLLRGYLSTLSKLRGRFNQIKNQGDPGPGARQLMQQTL
EGNGSELADALKYVDEQMLTGMDASQRQALRPLLVRPLLQAYAVTIQPTAVEVNKIWSAQ
VHQPFQQSLATKYPFAAGAKIEASPAEIAQFFGPEGAIGKFVTTTLGSLVIRRGDLLSPR
AWGDQGLTLSPDFVNGFAQWVAPLSGAAASGGGGAAQPQTLFQILPQPVSGLTEYMVEID
GQQLRYRNTPPQWSNFVWPNAQGTPGARITAVTFDGRTVELINEPGNFGLERLLSTAQRT
RLPDGSFELTWTRDNASVTIKLRVIQNTQSGASGGDSPQGKGLRGTVLPSSVAEIGVPAQ
ARAPVTAPASGVGK
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgcggcgatttttcagtttcctggtcgacccacgcaccctgtcggtgatcggcgccatc
gcgctgggcgcattcctgctgatcggcgcacagacgctggagatcggcgcgatctgggcc
gtcgcgatcttcgcggtgctgctgctgttgtggctgctggtctggttcatccggcgcatg
cgcacccgtgcggccaaccgcaagctcggcgacatgctcgaagagcaggccgatgcggcc
gtgcgcgacagcgaccccgagcgcaaggccgagatcgacgagttgcgcgcgcgcatggtc
gaagccgtcaagaccatcaagacctcgaagatcgggcagatgtcgggcagcgaggcgctg
tacgagctgccctggtacatggtcatcggcaatccagccgcgggcaagagcagcgccatc
ctgaattcgggcctgcagttcccgtttgccgacaagggcaacgcggtgatccagggtatc
ggcggcacgcgcaactgcgactggttcttcaccaccgaaggcatcgtgctcgacaccgcg
ggccgctattccattcaccaggaagaccgcaaggagtggttcggctttctggacctgctc
aagaagtaccgcccgaaggcaccgatcaacgggatcatcatcacggcgagcattcctgag
ttgatcggcagccggcccgacttcgcgatccagcttgcgaagaacctgcgccagcgcatg
caggagctgaccgagcggctcgaggtgtttgcgccggtctacgtgatgttcaccaaggcc
gacctgatcaccggcttcgccgagttcttcggcgacagcgacaagatggagcgagaccgc
gtgtggggcgcctcgctgccgtatgacggcgacgaaaaacaggacgcggtggccctgttc
gacaagcgcttcgatgagctttacctgggcctgaaggaaatcagcgtttcgcacttcgcg
acgaatcgcagcagcgacccgtcgcccgagctgctgatctttccgctcgagttcgcggcc
atcaagcccgcgctgcgtgccttcctggccacgctgttcgagagcaatccgttccagcac
aagccggtgttccgcggcttctacttcaccagtgcgctgcaggaaggcacgatgcgcagc
ctgtcgaccgagcgcattgccaagcgcttcgggctcacgctgaacaacgcggccaccaag
tccaaggaaatctattcgcagaacgggttcttcctgcgcgacctgttctccaaggtgatc
tttgccgacaagaagaccgtgcggcagttctccagcccggtcaagtcgcggctgcgctac
ctgagcttcttcgcctttgtcgccgtgctggggctcctgctgggcggctggacctggtcc
tacctcggcaacaagcagttggtggagaacgtgcaggccgacctcgacaaggtggtcaag
ctgcaggccagcgacaacgggctgcgaacgcgcttcgaggcattgggcatcctgcaggac
cgcatcgagcagctcgagaaattccgcaacgaccggccgctgtcgctgtcgctcgggctc
taccagggcaaccagctcgaagacaagctcgtggccgagtactacggcggcgtgaagcag
ctgatgctggtgccggtgtccgacaacctgcaggcctttctgcgcgaggtcaacgcgcat
ccggagcgcttgaagcgcgccgatgcggccggcaacccggccgcgccggtggcggtctcg
gccgccacgccggcagtgccgccggtcgcggagggcggcggcctgtatgcgggctcttcg
ccggccgacgtgcaggatgcctacaacgcgctcaagacctacctcatgctgtccgacaag
cggcaggtggagaccgcgcacctgaccgaccagatctcgcgattctggcgcggctggctc
gagagcaaccgcggtgacatgccccgcgcggcggtcatccgcgacgccgaacgcatgatc
accttctacctgcgccgcgtgggcgacgacaactggcccgcgctggcggacaccaacctc
gcgctggtcgagcagacgcgcgaaaacctgcgccgggtcgtgcgcggcatgcccgcacgc
gaacgggtctacgccgaaatcaaggcgcgcgcttccacgcgcttcgcgccgatgacggtg
gcacgcatcctgggcgcaaccgccggtagcaccgagagcgaaggctccattgccggcagc
atcgccatctcgggcgcgttcacgcgcgaggcctggcagcagtacgtggacgatgcgatc
cgcgacgccgccaacaaggaaacctcgagcaaggactgggtgctcaacgttgcgggcaat
gacgacctgacgctcgaaggcagccccgagcagatccgcaagacgctggccaccatgtac
aagctggagtacgccaaggagtggcagcgcttcctgcagggcatcgcggtcaaggacatg
ggcagcttcgagcaggcggtggtggcgatgaacctgctgggcgatccgcagaactcgccg
atccgcaaggtcttcgacacggtctacgagcagacctcctgggacaacccctcgctggtc
aatgccggcttgcagcaggcgcgcacgggggcgttcaactggatcaagcgcctcttcagc
cgcgccacgccgtcgcaactcaacgtgaccatcgacgccagcggcaacccgacggaaatt
ccgatggggccgatcggcaaggagttcgcaggcgtggcgcgcctggtggtcgagcgcgac
aacacctcgctgctgcgcggctacctgagcacgctgtccaagctgcgcggtcgcttcaac
cagatcaagaaccagggcgaccccggaccgggtgcgcgccagctcatgcagcagacgctg
gagggcaacggctctgagctggccgacgcgctcaagtacgtggacgagcagatgctcacg
ggcatggacgcctcgcagcgccaggccctgcggccactgctggtgcggccgctgctgcag
gcctatgcggtgacgatccagccgacggcggtggaggtcaacaagatctggagcgcacag
gtgcaccagccgttccagcagtcgctcgccaccaagtacccgtttgccgccggcgcgaag
atcgaggcttcgccggcggaaatcgcgcagttcttcgggcccgaaggcgccatcggcaag
ttcgtgacgaccacgctgggctcgctggtcatccgacgtggcgacctgttgtcgccgcgc
gcctggggcgaccagggcctcacgctgagtcccgatttcgtgaacggcttcgcgcaatgg
gtggcgccgctctcgggcgctgcggccagcggaggaggcggcgccgcacaaccgcagacg
ctgttccagatcctgccgcagcctgtgtcaggcctgacggaatacatggtggaaatcgac
ggccagcagctgcgctaccgcaacacgccgccgcagtggtccaacttcgtctggcccaac
gcgcaagggacgccgggcgcgcgcatcaccgccgtcaccttcgacgggcgcaccgtcgag
ctgatcaacgagcctggcaacttcgggctggagcgcctgctcagcacggcccagcgcacg
cggctgcccgacggcagcttcgagctcacatggacgcgcgacaacgcgagcgtgaccatc
aagctgcgcgtgatccagaacacgcagtcgggcgcctcgggtggcgattcgccgcagggc
aagggcttgcgcggcaccgtgctgccttcgtcggtcgcggagattggcgtacccgcgcaa
gcgcgcgcaccggtaacggcaccagcatcgggagtcggtaaatga

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