Variovorax sp. PAMC26660: H7F35_29405
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Entry
H7F35_29405 CDS
T10234
Name
(GenBank) YadA-like family protein
Organism
vaz Variovorax sp. PAMC26660
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Paralog
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
QNK67226
LinkDB
All DBs
Position
complement(6255921..6260717)
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AA seq
1598 aa
AA seq
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MNTTYRSLWNESLGAWVAASELTCSRGKRSGSCVAASALTLSPSRRLRSGIVTALLTLGG
LGGVSLAQAQVNCTAAPYYVYSGSSTCAGTQSQATFGGATAIGFNALSTGLNATTLGYQA
LASATNALYLGARTAAGTGALAQSAIAIGTDVTASGQAAVAVGVQSQATGEAATGVGSLA
RALGKSSLALGTQALAMGESTVAVGQGAGAGSTIANTGSIAMGTATGTLVSGALNTAVGG
GTPSVMRGAGSGVTGTRNVAFGTGDGTVAYDATLKAAAGSLVSGNDNIAVGTNAGIGVTS
NATTSIGLNAIASLENAIAIGSNARANAVEAVAIGTNATATGGRSVSIGSGNVANGNGAV
AIGDPNTATGNGAVANGMDNTATGDGSVAMGNTNKVGGGGQDVGVAGTAAQGAVGIGYQN
TVVGQGSVAIGSTSKALAAGAVAFGDTAVANNARDVALGSGSVTATAVGTPSATINGKLY
NFQGIAPTSTASVGAAGAERTITNVAAGRISGTSTDAINGSQLNATNSAITDVSTVANKG
FNVTTGATGTGTVTGTSVSNVAPGGTVTYTAGNNIALTQAGNAVTIATSATPSFTSVTTG
NTTLNTNGVTIVGGPSVTTTGINAGGTQITNVAAGTAATDAVNLNQLTTTVAASKTKYYQ
VNSTGGGNEANDGATGTDAIASGKNATAAGTSSVAMGLGATAGTANSVALGAGSVTATAV
ATPSTTINGTVHNFQGIAPVGTVSVGAVGAERTITNVAAGRISGTSTDAINGSQLSATNS
AIADVATTAGKGWNLSANGEATPQNIAPGGTADFANGSNTTVTRTGNQIKVDVVADPVFN
SVTTGNTKIDNNGLTIVGGPSVTLTGINAGSKVITNVAPGVAGTDGVNVNQLTSTVAGSK
TKYYQVNSTGGGNEANDGATGADAIASGKNATAAGASSVAMGLGATAGTANSVALGAGSV
TATAVGTPSTTINGTTYNFQGIAPVGTVSVGTVGGERTITNVAAGQISRTSTDAINGSQL
FATNSAITDLSVVANRGFNLTTGATGTGTVTGTSASNVAPGGTVTYTAGDNIALTQAGNT
VTIATSATPSFTSVTTGNTTMNANGITIVGGPSVTTTGINAGGTQITNVAAGTAATDAVN
LSQLTTTVAGSKTKYYSVNSTGGGNEDNLGATGADAIASGKDASATVAGSVAIGSGSVSD
RAIAGSTGNIPAGSSLIPFNTTDRTLLGALSVGSATTYRQITNVADGTQAQDAVTVRQLS
GALQSFAVTPIQYFHANSTAADSLAIGAESVAVGPQTVVNGNNGVGIGNGAVVQQSAPGG
IAVGQGATSHLADSIAMGTNASAAAVQGVALGAGSSVTQAGGVALGAGSVASTGSGVAGY
IPPTATDAQRIAIGATTSTLAAVSVGDAANGQFRQITGVAAGTANSDAVNVSQLRGVQGQ
VAVIDQSTVKYDTNPDGSINYNSVSMGGSNATGPVTVHNVAPGVAGTDAVNVNQLNSGIA
GANAYTDARVNALGGEIRSIAKDASAGTAGAMAMANMPQAYIPGKSMVAAGVASFDGQAA
LAIGVSKLSDNGRWVVKFSGSANSRGKVGMAAGAGFHW
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacttatcgctcgctctggaatgaatcccttggcgcctgggtcgcggcgtcg
gagctcacttgctcccgcggcaaacgcagcgggagttgcgtggcagccagtgcgctcacg
ctgtcgccatcgcggcgtctgcgctcagggatcgtgaccgcgctgttgacgctgggcggg
cttggaggggtctctctggcgcaggcacaggtgaactgcactgcggcgccgtactacgtc
tacagcggcagctcgacgtgcgcgggtactcagtcccaagcgactttcggcggagccact
gccataggttttaacgccctcagtacggggctgaatgccaccactctcggctaccaggcc
cttgcctctgcgaccaacgccctttacctgggtgcgcgcaccgccgccgggacaggtgca
ttggcccagagcgccattgcgatcggcacagacgtgaccgccagtggacaggctgccgtt
gccgtcggcgtccaatctcaagcaactggcgaagcagccaccggcgtcgggtccctcgct
cgggcgctagggaagagttcgttggcgctcggaacacaagcgctcgctatgggggaaagc
acagttgcggtcggccagggtgcgggtgcgggctcgacgatcgccaatacgggttcgatc
gcaatggggaccgccaccggaacgctggtcagcggcgcgctgaacaccgccgtgggggga
ggcactccaagcgtgatgcggggcgcgggttcgggcgtcacgggaacgcgcaacgtcgcc
ttcggcacaggcgacggcacggtcgcctacgacgcaaccttgaaggctgcggcaggcagc
ctggtcagcggcaacgacaacatcgccgtcggcaccaacgcaggcatcggcgtcacgagc
aacgcgacaacgtcgatcggcctgaacgcgatcgcgagcctggagaacgcgatcgccatc
ggcagcaatgcccgggcgaatgcggtcgaagcggttgcaatcgggaccaacgctaccgcc
accggcggtcgctcggtctccatcggctccggcaacgttgccaacggcaacggcgcggtg
gcgatcggcgacccgaacaccgcgactggcaacggcgcggtggcgaacggcatggacaac
actgccaccggcgacggttcggtggccatgggcaacaccaacaaggtcggtggcggcgga
caggatgtgggcgtcgccggcacggcggcacaaggcgcggtcggcatcggctaccagaac
acggtggtcggccaaggcagcgtggcgatcggcagcaccagcaaggcgctggccgcgggc
gcggtcgcgttcggcgacacggcagtggcgaacaacgctcgggacgtggcgctaggctcc
gggtcggtcactgcaacagcggtgggcacgcccagcgcgacgatcaacggcaagctctac
aacttccagggcatcgcgccgacgagcacggccagcgtcggcgcggcgggcgccgaacgc
accatcaccaacgtcgcggccggcaggatttccgggacctcgacagatgccatcaacggg
agccagctgaatgccaccaattcagcgatcaccgatgtgtcgaccgtggcgaacaagggc
ttcaacgtgacgacgggagcgacaggcaccgggacggtgaccggtacgagcgtgtcgaac
gtggcgcccggcggcacggtgacatacaccgccggcaacaatatcgcgctgacccaggcg
ggcaacgcagtcaccatcgccaccagcgccacgccttcgttcaccagtgtgacgacaggc
aacacgacgttgaataccaacggtgtcacgatcgtcggcggcccgagcgtgacgaccacc
ggcatcaatgccggtggcacgcagatcacgaacgtggcggcggggacggccgccacggat
gctgtcaacctgaaccagctgaccaccacggtagctgccagcaagaccaagtactaccag
gtcaactccacaggtgggggcaacgaagccaacgacggtgcgaccggcaccgatgccatc
gcatcgggcaagaacgcaacggccgcaggtacctccagcgtggccatgggtctgggcgcc
acggccggcacggccaacagcgtggcgctgggcgcgggctcggtcacggcgacggcagtg
gcgacgccgagcacgacgatcaacggcacggtacacaacttccagggcatcgcgccggtg
ggcacggtcagcgtcggcgcagtcggcgccgaacgcacgatcaccaacgtggcggctggt
cggatctccggcacgtcgaccgatgcgatcaacggctcgcagctgtccgccaccaactcg
gcgatcgccgacgtggcaacgacagcgggcaagggatggaacctgagtgccaatggcgag
gcgacgccgcaaaacattgcgccaggcgggacggcggatttcgccaacggcagcaacacg
acggtcacgcgcacgggcaaccagatcaaggtcgatgtggtggcagatcccgtcttcaat
tccgtgaccacgggcaacacgaagatcgacaacaatggcctgaccatcgtgggtggcccg
agcgtgaccttgaccggcatcaatgccggcagcaaggtgatcaccaatgtggcgcccggc
gtggccggcaccgatggcgtgaatgtcaaccagctgaccagcacggtggccggcagcaag
accaagtactaccaggtcaattccacgggcgggggcaacgaagccaacgacggcgcgacc
ggtgccgatgccatcgcatcgggcaagaacgcaacggccgctggtgcctccagtgtggcc
atgggcctgggcgccacggctggcacggccaacagcgtggcgctgggtgcgggctcggtc
acggcaacagcggtcggcacgcccagcacaacgatcaacggcacgacctacaacttccag
ggcatcgcgccggtgggcacggtcagcgtcggtacggtcggcggcgaacgcacgatcacc
aacgtggcggccggccagatttccaggacctcgactgatgccatcaacggcagccagttg
tttgccaccaattcagcgatcaccgatctgtcggtcgtggcgaacaggggcttcaacctg
acgacgggagcgaccggcaccggcacggtgaccggcacgagcgcgtcgaacgtggcgccc
ggcggcacggtgacgtacaccgctggcgacaacatcgcgctgacccaggcgggcaacacg
gtcaccatcgccaccagcgcaacgccttcgttcaccagtgtgacgacaggcaacacgacg
atgaacgccaatggcatcacgatcgtcggtggcccgagcgtgacgaccaccggtatcaat
gccggtggcacgcagatcacgaacgtggcggccggtacggcggccacggatgccgtcaac
ctgagccagctgaccaccacggtggccggcagcaagaccaagtactacagcgtcaactcc
acgggcgggggcaacgaggacaacctcggcgccacaggtgccgacgccatcgcctcgggc
aaggacgccagcgcaaccgtcgcgggctcggtggccatcggctcaggctccgtctccgac
cgcgccatcgcaggcagcactggcaacatccccgcgggcagctcgctgatccccttcaac
acaaccgaccgcacgctgctgggcgcgctctctgtcggcagcgccaccacctaccgccag
atcaccaacgtggccgacggcacccaggcccaggacgccgtcacggtgcgccagctcagc
ggtgcattgcagtcctttgcggtcacgcccatccagtacttccatgccaactccactgca
gccgattcgctggccatcggcgcggagtcggtggcggtcggcccgcagacggtggtcaac
ggcaacaacggcgtgggcatcggcaacggcgccgtggtgcagcaaagcgcgccgggcggc
attgcggtcggccagggcgcgacatcgcacctcgccgattcgattgccatgggcacgaac
gcgtcggcggcggccgtccagggcgtggcactgggcgcgggcagcagcgtgacgcaggct
ggtggcgtggctttgggcgcaggctccgtggcttcgacggggtcgggcgttgcaggctac
ataccgcccactgcaaccgacgcgcagcgcatcgccatcggcgcgaccaccagcacgctg
gcggccgtctcggtgggcgatgcggccaatggccagttccgccagatcaccggcgtggcc
gcgggcacggccaacagcgatgcggtcaacgtctcacagttgcgaggcgtgcaaggccag
gtggcggtgatcgaccagtcgacggtcaagtacgacacgaacccggatggatccatcaac
tacaacagcgtgagcatgggcggcagcaatgccactggcccggtcaccgtgcacaacgtg
gcgccgggcgtggcgggcaccgatgccgtcaacgtcaaccaactcaacagcggcatcgcg
ggggccaacgcgtataccgatgcacgcgtcaatgccctcggcggtgagatccgcagcatc
gccaaagatgccagtgcgggcaccgccggtgcgatggccatggccaacatgccgcaggcc
tacattccgggcaagagcatggtggccgcgggtgtcgcgagctttgacggacaggcggca
cttgccatcggcgtgtcgaagctttcggacaacggcaggtgggtcgtgaagttcagcgga
tcggccaattcgcgcgggaaggtcggcatggcagccggcgcgggcttccattggtaa
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