Variovorax sp. PAMC26660: H7F35_29860
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Entry
H7F35_29860 CDS
T10234
Name
(GenBank) TRAP transporter large permease subunit
KO
K21393
TRAP-type transport system permease protein
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H7F35_29860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_29860
Transporters [BR:
vaz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H7F35_29860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
Motif
Other DBs
NCBI-ProteinID:
QNK67309
LinkDB
All DBs
Position
complement(6346511..6348421)
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AA seq
636 aa
AA seq
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MSSLSISPGAPSMQPLALPPALGFDVSHASGRWLAWLMRVTEYLAGVVLAIDVVVVFISV
IFRYFLHDPFDWAEEVARALMVIQVFFGAATVLARSQHVGVDLFRGMLPASWQPALIQLG
SWIIVGVSASLFASSCELLVDSYSMTTSIGLPQWIYVYPVTIGSLFMTLFGLANAVNGPS
RRVWGTLGVGIALTAFVVAWNTLLSDHAIPPWALLTAGFLGGMALGMPIAFVLALSSLVF
FMADPSLPMLVYSQQVMAGTDHYVLLAIPFFVLAGLLMEANGMSSRLIELLLRMFGRLRG
GLGLITITATAFFSGVSGSKLADIAAVGGIIMPAVRRTKQDPNETAGLLACTAVMAETIP
PCINMIIMGFVANISIAGLFMAGLVPAVVMAVSLAAVTIYVGTKINPDDAFEVRTPMFRL
LGGALVALVMVAMIGKGVTSGIATSTEVSSFAVIYALVVGWLAFRELTVKSVARLFVRSA
SMAGGILFIVAAASSLSFALTIQQIPQYLSEFMIGFAHSYGSTMFVMLSVLIMIVFGAIL
EGAPALIIFGPLLTPIASQLGVNPLHFGTVMVIAMGFGLFAPPVGLGLFATCAITGTQVK
DVARPMLKYLAVLFVTLVVLVLVPAFSTWLPARVGL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctttcgatttcaccgggcgccccgtcgatgcagccgcttgcactgccgccc
gcactgggcttcgatgtgagccatgcctcgggccgctggctggcctggctgatgcgcgtc
accgaatacctggccggcgtggtgctggccatcgacgtggtggtggtcttcatctcggtg
atctttcgctacttcctgcatgaccccttcgactgggcggaggaggtggcgcgcgcgctg
atggtcatccaggtgttcttcggcgcggccacggtgctcgcgcgcagccagcatgtgggc
gtggacctgttccgcggcatgctgccggcgagctggcagccggcgctgatccagctaggg
agctggatcatcgtgggcgtgtcggcgagcctctttgcctcgtcgtgcgaactgctggtc
gactcgtacagcatgacgacatccatcggcctgccgcagtggatctacgtctatcccgtg
accatcggcagcctgttcatgacgctgttcgggctggccaatgcggtcaacggcccgtcg
cgccgggtgtggggcacgctgggcgtgggcattgcactgacggcctttgtcgtcgcgtgg
aacacgctcttgagcgaccacgcgatcccgccatgggcgctgctcaccgccggcttcctg
ggcggcatggcattgggcatgcccatcgccttcgtgctggcgctgtcgtcgctggtgttc
ttcatggccgatccgtcgctgcccatgctggtctattcgcagcaggtgatggcgggcacc
gaccactacgtgctgctggccattccgttcttcgtgctggcgggcctgctgatggaagcc
aacggcatgtcgtcgcggctcatcgagctgctgctgcgcatgttcggacggctgcgcggc
gggttggggctgatcaccatcacggccaccgccttcttctcgggcgtgtcgggctccaag
ctggccgacatcgcggcggtgggcggcatcatcatgccggccgtgcgcagaacgaagcag
gacccgaacgaaacagccggcctgctggcctgcaccgcggtgatggccgagaccattccg
ccctgcatcaacatgatcatcatgggcttcgtggcgaacatctcgattgccgggctgttc
atggccgggctggtgccggcggtggtgatggccgtgtcgctggcagcggtgaccatctac
gtgggcaccaagatcaaccccgacgatgccttcgaggtgcgcacgccgatgttccgcctg
ctcggcggcgcgctggtggcgctggtgatggtggccatgatcggcaagggcgtgacctcg
ggcattgcgacatcgaccgaggtgtcgtccttcgcggtgatctacgcgctggtggtgggc
tggctggcctttcgcgagctgacggtgaagtctgtggcgcggctgttcgtgcgctcggcg
tcgatggccggcggcattttgttcatcgtggcagcggcgtcgagcctgtctttcgcgctc
acgatccagcagattccgcagtacctgtcggagttcatgatcggctttgcgcattcgtac
ggcagcacgatgttcgtgatgctgtcggtgctcatcatgatcgtgttcggcgccatcctg
gaaggcgcgcccgcgctcatcatcttcggcccgctgctcacgcccatcgcttcacagctc
ggggtgaaccctctgcacttcggcaccgtgatggtcattgccatgggcttcggcctgttc
gcgccgccggtgggcctgggcttgttcgctacctgtgccatcaccggcacgcaggtgaag
gacgtggcccggccgatgctgaaataccttgccgtgttgttcgttaccctcgtggtgctg
gtcctggtgccggcgttctccacgtggctgccggcgcgcgtggggttgtga
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