KEGG   Variovorax sp. PAMC26660: H7F35_30030
Entry
H7F35_30030       CDS       T10234                                 
Symbol
sctC
Name
(GenBank) type III secretion system outer membrane ring subunit SctC
  KO
K03219  type III secretion protein C
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_30030 (sctC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_30030 (sctC)
Secretion system [BR:vaz02044]
 Type III secretion system
  Type III secretion core apparatus
   H7F35_30030 (sctC)
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: QNK71773
LinkDB
Position
complement(6392439..6394136)
AA seq 565 aa
MLLVAQHSRAADFHWQNRPFQIVANEKPLNDFLRELVSSQGMTAVIDPKVNGVISGKFDG
PARNILNSVCSVNGLTWYFDGAFLFIDLAADAKSEVLPIAAENAGRIAQTLVRLHISDER
YPLSISENDASVYVTGPRRYVEMVRQAVKLADQKTALAEGAEIRLFPLKYAWASDFKINR
SGKETVVAGVANVLRSLYGRSGNSAGANGGGRGTSGTVSVGPNRQIKLRSGDSINAPRID
VAGAGPATDSPATLGGMSSVMGNELPQFQADTRMNAVLVRDMPDKMAQYQKLIEAMDTRP
RLVEIEVTIMDISSDTLSSLGVDWRLHGTHADFQTGNGTRTPLTWGGTGSEAGQVGSVDT
SGNPLTPLGGMFTAAIGNSARNYLLARVTALATNGNANFVARPKVMTLDNTEAVLENLSE
FYVKVDGFQDAGLFSITAGTSVRVTPLIIDEATGRGVMMSIDIVDGDLSTQSVNQIPIVR
RRNVNTQALVDEGASLLIAGYSSEEKSNAVTGVPLLKDIPGVGNLFKYTDKKQSNMERFY
LLTPRLVMPGTTVALPPLHVPEPGG
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgctgctggtggcgcagcacagcagggcggccgatttccattggcagaaccggcccttc
cagatcgtggccaacgaaaagccgctgaacgactttctgcgtgagctggtttcgtcgcaa
ggcatgaccgcggtgatcgaccccaaggtcaacggcgtcatcagcggcaagttcgacggg
ccggccaggaacatcctgaacagcgtgtgctcggtcaacggactcacctggtacttcgac
ggtgcgttcctcttcatcgacctcgcagccgatgccaagagcgaggtgctgccgattgcc
gccgagaacgccgggcgcattgcccagacgctggtgcgcctgcacatctccgacgagcgc
tacccgctgagcatcagcgagaacgatgccagcgtgtacgtgaccggtccgcgccgctac
gtggaaatggtgcgccaggccgtcaagctggccgaccagaagaccgcgctggccgagggc
gcggagatccgcctgttcccgctcaagtacgcgtgggcctccgacttcaagatcaaccgc
tcgggcaaggagacggtggtggcaggcgtggccaacgtgctgcgcagcctctacgggcgc
agcggcaacagcgccggcgccaacggcggcggccgcggcaccagcggcaccgtgtcggtg
gggccgaaccggcagatcaagctgcgcagcggcgattcgatcaacgcgccgcgcatcgac
gtggcaggcgccgggcccgccaccgacagccccgccacgctgggtggcatgtcgagcgtg
atgggcaacgagctgccgcagttccaggccgacacgcgcatgaacgccgtgctggtgcgt
gacatgcccgacaagatggcgcagtaccagaagctgatcgaggcgatggacacgcgcccg
cggctggtcgagatcgaggtgaccatcatggacatcagctccgacacgctcagcagcctg
ggcgtcgactggcggctgcatggcacgcatgccgattttcaaaccggcaacggcacgcgc
acgccgctgacctggggcggcacgggcagcgaggccggacaggtgggcagcgtcgacacc
tcgggcaacccgctcacgccgctgggcggcatgttcaccgcggccatcggcaacagcgcg
cgcaactacctgctggcccgcgtgaccgcgctggccaccaacggcaacgcgaacttcgtg
gcccgcccgaaggtgatgacgctggacaacaccgaggccgtgctggaaaacctgagcgag
ttctacgtgaaggtggacggcttccaggacgcgggcctgttcagcatcaccgccggcacc
tcggtgcgcgtgacgccgctgatcatcgacgaggccacggggcgcggcgtgatgatgtcc
atcgacatcgtcgacggcgacctgagcacgcagagcgtgaaccagatcccgatcgtgcgc
cgccgcaacgtcaacacccaggcgctggtcgacgagggcgcgagcctgctgattgccggc
tactcgtcggaagaaaagagcaacgcggtcacgggcgtgccgttgctcaaggacattccg
ggcgtcggcaatctcttcaagtacaccgacaagaagcagtccaacatggagcgcttctat
ctgctcacgccgcgcctggtcatgccgggcaccacggtcgcgctgccgccgctgcacgtg
ccggaaccgggaggctga

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