KEGG   Variovorax sp. PAMC26660: H7F35_30040
Entry
H7F35_30040       CDS       T10234                                 
Symbol
sctV
Name
(GenBank) type III secretion system export apparatus subunit SctV
  KO
K03230  type III secretion protein V
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_30040 (sctV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_30040 (sctV)
Secretion system [BR:vaz02044]
 Type III secretion system
  Type III secretion core apparatus
   H7F35_30040 (sctV)
SSDB
Motif
Pfam: FHIPEP CrgA
Other DBs
NCBI-ProteinID: QNK67343
LinkDB
Position
complement(6394511..6396583)
AA seq 690 aa
MASPARSLQHYRGGLRDLLGNAGRYNDLLLAGLLVVVVALFVLPLPTPLLDLLIASNLAI
SLVLLIVAMYVPSALSLSTFPSLLLFTTLFRLALNIASTKLILLQANAGHIIDTFGKLIV
GNNVVVGGVVFLIIAIVQFIVIAKGSERVAEVAARFALDAMPGKQMSIDADVRAGVLSSA
KAQKRRQLLEQECQLHGAMDGAMKFVKGDAIASIVIALVNILAGIAIGTLMHDMTLGGAL
QRYAILTVGDGMVSQIPSLLVSIAAGIVITRVSTGERRDTQLAQQIGEQLMAHPRALIIA
GLAVASFLVVPGFPKWVFGLLAAVLLGLGLSMRMLRQQRNTPGWISHTGGVAAEETDTDH
AIAAPLAVRLSAGLRNAVDRYVLDQHLSAVKTSVEADLGPIFPRLQLNYADGLADNDYQV
LVHDVAVARGTLKPGWLLLDPSAAVSPPSGAEVAEPFGPFARVVWVPGTEPGVTTWTGAQ
VVSLHVDHAVRRNVKELIGLQEVQRLLHSVQRDAPELAAEVLRVASAQRIAEVLRRLLQE
GIPIRNLHAIFESLTMWAAKEQDGIALTELVRIHLGRYITSRYVGANRQLEAILFESALL
ERVQNAVERSPRGNLLLLSPAVTQDIRDQVRRVLGATAQRVVAIASADVRRYIKTLIEPV
APQLAVLSYQEIDDDVALQPVGWITNPQAH
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcgagtcccgcgcgatctcttcagcactaccgtggcggtcttcgcgacctgctcggc
aacgcaggccgctacaacgatcttctgctcgccggcctgctggtggtggtggtcgcgctg
ttcgtgctgccgctgcccacgccgctgctcgacctgctgatcgcgagcaacctggccatc
agcctggtgctgctgatcgtggcgatgtacgtgccttcggcgctgtcgctgtcgaccttt
ccgtcgctgcttcttttcactacgttgttccggctcgcgctgaacatcgcgtcaaccaag
ctgatcctgctgcaggccaatgcaggccacatcattgacaccttcggcaagctcatcgtg
ggcaacaacgtggtggtgggcggcgtggtgttcctcatcatcgcgatcgtgcagttcatc
gtgattgccaagggctcggagcgcgtggccgaggtggcggcgcgcttcgcgctcgacgcc
atgcccggcaagcagatgagcatcgacgccgacgtgcgcgccggtgtgctctcgtcggcc
aaggcgcagaagcggcgccagctgctggagcaggaatgccaactgcacggcgcgatggac
ggcgccatgaagttcgtgaagggcgatgccattgccagcatcgtgatcgcgctggtcaac
atcctggcgggcattgccatcggcacgctgatgcacgacatgacgctgggcggcgcgctg
cagcgctacgccatcctcacggtgggcgacggcatggtgtcgcagattccgtcgctgctg
gtgtcgattgccgcgggcatcgtcatcacccgcgtgagcaccggcgagcgccgcgacacg
cagctcgcgcagcagatcggcgagcagctgatggcgcacccgcgcgcgctcatcatcgcg
ggcctggcggtggccagcttcctcgtggtgccgggttttccgaagtgggtgttcggcctg
ctggcggccgtgctgctggggctgggcttgtcgatgcgcatgctgcgccagcagcgcaac
acaccgggctggatctcgcacaccggcggcgtggccgccgaagaaaccgacaccgaccac
gccattgccgcgccgctggccgtgcgcctgtcggcggggctgcgcaacgcggtcgaccgc
tatgtgctcgaccagcacctgtcggccgtcaagacctcggtggaggccgacctcggcccg
atctttccgcgactgcagctcaactatgcagacggcctggccgacaacgactaccaggtg
ctggtgcacgacgtggcggtggcgcgcggcacgctcaagcccggctggttgctgctcgat
ccgtccgccgccgtgtcgccgccgtcgggtgccgaagtggccgagcccttcgggccgttc
gcgcgcgtggtgtgggtgccgggcacggagcccggcgtgaccacctggactggcgcacag
gtggtgagcctgcacgtggaccatgccgtgcgccgcaacgtgaaggagctcatcggcctg
caggaagtgcagcgcctgctgcattcggtgcagcgcgatgcgccagagctcgcggccgag
gtgctgcgcgtggcttcggcccagcgcattgccgaggtgctgcgccggctgctgcaggag
ggcattcccattcgcaacctgcacgcgattttcgagagcctgacgatgtgggccgcgaag
gaacaggacggcattgcgctgaccgagctggtgcgcatccatctcgggcgctacatcacc
agccgctatgtgggcgccaaccggcagctcgaagccatcctgttcgagtcggcgctgctg
gagcgcgtgcagaacgccgtcgagcgctcgccgcgcggcaacctgctgctgctgagcccg
gcggtcacgcaggacattcgcgaccaggtgcgtcgcgttctcggcgccacggcccagcgc
gtggtggccatcgcttcggcggacgtgcgccgctacatcaagacgctgatcgagcccgtg
gcaccgcagctcgcggtgctttcgtaccaggaaatcgacgacgacgtggccctgcagccg
gtgggctggatcaccaatccgcaagcccattga

DBGET integrated database retrieval system