Variovorax sp. PAMC26660: H7F35_31375
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Entry
H7F35_31375 CDS
T10234
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vaz Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaz03016
]
H7F35_31375 (truB)
Enzymes [BR:
vaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H7F35_31375 (truB)
Transfer RNA biogenesis [BR:
vaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H7F35_31375 (truB)
Prokaryotic type
H7F35_31375 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QNK67593
UniProt:
A0A7G8VHK0
LinkDB
All DBs
Position
complement(6673918..6674895)
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AA seq
325 aa
AA seq
DB search
MNAPRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYEATARLGVKTATGDAEGDVIAERPVNVTPQDLARVQAQFTGP
IRQVPPMHSALKKDGKALYEYAREGIEVERAPRDVIIYKLDLTELVESAARQGQRAIGIA
ATVSKGTYIRTLGEDIGEALGCGAHLTSLRRTATGDFGQAQCITLEALEAMDEEERLAQL
LPAESLVDGHSRVTLGAEDAARFLSGLRRRGGWADATEVAVFGSEPHAFLGTAHVVAGEL
IPGRLLNPIEIQQILLNAQQTEATP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccacgcacaagggtgcagcggcgccctgtgcatggggtgttgttgctcgac
aaaccgctgggactctccagcaaccaggccttgcaaaaggccaagtggttgctgcgcgcc
gaaaaagcgggccacaccggcacgctcgatccgctcgccacgggtgtcctgccgctttgc
tttggcgcggccaccaaattcagccagttgcatctggatgccgacaagacctatgaggcc
acggcccgtctcggcgtcaagaccgcgaccggcgatgccgaaggcgacgtgatcgccgaa
cggcctgtcaatgtcacgccacaagacctggcgcgtgtgcaggcgcagttcaccggcccg
atccggcaggtgcctccgatgcacagcgcgctcaagaaggacggcaaggcgctgtacgag
tacgcacgcgaaggcatcgaagtcgagcgggcgccgcgcgatgtcatcatctacaagctg
gacctgaccgaactggtcgagtcggccgcacggcaagggcagcgcgccatcgggatcgct
gcgaccgtgagcaagggcacctacattcgcaccctcggcgaagacatcggcgaggcactc
ggctgcggtgcgcacctgacatcgctgcgccgcacggcgaccggcgacttcgggcaggcg
caatgcatcacgctcgaagcgctcgaagccatggacgaagaggagcgcctggcgcagctc
ttgcctgccgaatcgctggtggacggccacagccgcgtcacgctcggcgcggaagatgcg
gctcgctttctttcgggcctgcgccgccgcggcggctgggccgacgcgacagaggtggcc
gtgttcggcagcgaaccgcatgccttcctcggcacggcccacgtggtggccggcgaactg
atcccggggcgcttgctgaaccccatcgaaattcagcaaattcttttgaacgcacaacag
accgaagcgacaccatga
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