Variovorax sp. PAMC26660: H7F35_31950
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Entry
H7F35_31950 CDS
T10234
Name
(GenBank) RHS repeat protein
Organism
vaz Variovorax sp. PAMC26660
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Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-ProteinID:
QNK67699
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Position
complement(6827136..6831806)
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AA seq
1556 aa
AA seq
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MRLLSQILRRVRDAVTPSGLSSNGGSSESKRKVWRSPVIAHLLMAWAGLLVGAHASATEA
EPGIPDIFIEYRSQLLRVPAGVQPWVTGPEVLPMCNQATSLVGGPDYLDQAILDEPPSVP
YVEYPTVGDRLYSGVCFMSWKQVASHYTAQVVYFHRISACPANSTHLYAATRCTCQTGFA
AKNNACVKTPPRELPNMCRAGDPAGFVAGNPIVPMTGDKIESVTDFADLGPSPLMLQRSY
RSSLGLNPDRSDSGFGRAWTLKGGASLTRSSSVSPEEVTIEFSAGHVRTFQANGTGGWSD
SRNPSSTLMPTAGGGWSYKSGDDDVTLNFNSAGKLLSTVPPNGWMTTYTYNASGQLATIA
NVFGRVLTFSYDGNGQVASVTTPDARVINYSYDATKRLASVTYPDAKAVGYLYESSAFRY
ALTGITDEAGLRYATFAYDGAGNAISTEHAGGVNRYQVVRNATDGVVVNATVIDPLGTSR
SYGYEPFSPKPIVSTSSLPSGDGAPSFAKREQSLSGAVLSEYETDFKGRLASRTTWDQTR
WLPVSMDRDLYADEPQTVKTVWHASFRLPVSVTEVGRLTNYSYDALGNVLSKIVTDRVTR
KEQTWEWTYNTQQLVATAKEPNGAVTSYAYDTRGNMLTSTNALGHVTTYSYDNANRVASS
TAPNGLVTTYTYDARDRLLTQTVGGQATTITYKPFGTVETITLPTSLVLTYAYDAAHRLI
GWSNNRGEFGTYTLDGMGNRTAEQIKDSAGQVAWSMARTVNNINRISKKTEGSNQTSTLG
YDANGDLSSESNGLNQTTGYELDVLRRVTRVTNAAGDGASIQYNPLNAVTTTWDFKNVAT
NYKRDAQGNATTEASADVGSASTQYDNLGLPSQITDALGQATTITRDALGRPTSLVFADG
KTTTLRYDLTANSKGYLSEIVDRSGTTEYTRDAFGRVTLKKQTLINGSVQQVSYGYNANG
TLASIGYPNGATLTHLYDATGRLAGLNWNGNPLVAGIAWNPLGQPIAWTWAFANPAVAAS
RTYDTAGRMTATDFSSYVYDAAGRITSLTQNLYQPGDTDPTHSTISLAPQTWTVGYNNVG
RIVSFNATGNTAGFGYDANGNRSSSTRAVNGLSTNRTYTVGASSNQLTGFTQSINGASNT
SVTYGYNTNGDMVTDGLRSYTYDAEGRLGASTTGATDSSPTTRYAHNALGQRVFKTEPLY
PPSQGNAADPGFMQSLIAFFTKLWSPSTSQAEQLGYAYVYDEQGTLIAEVGSGGTNSAGQ
SQYIYLPTANGPMPIAAIVNGNTFAVHSDHLNTPRKLTNADGQAVWQWSYSAFGEDKPTL
ARNRFANLEATPNPGTTNLSEVRFNLRYPGQYADEESGLFYNGFRTYDPRVGRYTQSDPI
GLEGGWNRFGYVGGNPLSYVDPDGLQALPKTVDPAPRMFPPAANDPLYRAGSGAMRPVTA
SNLAMMAFAAGVLTYQMCNPEDNCDSRLVAIYRLMAEVEGRLTDLYFDKLNLKINAPQKP
SPSLPAGSGSWNGHIQQLEQKQGQLRRAITDALASGCKVPPFAFRLAYASLPDRIL
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctgagccaaattctgcggcgcgttcgagatgcggtgacgcctagcggcttg
tcgtcgaacggcgggtcatccgaatcgaaaaggaaggtttggcgctctcccgtgatagcg
catcttctgatggcctgggccggtctgcttgttggcgcccacgccagcgcaacggaagcg
gagccaggcatcccagatatttttattgaataccgctcacaactcttaagagtacccgct
ggcgtacagccttgggtcaccgggccggaagtacttccgatgtgcaatcaggccaccagt
ttagttggcggtcccgactacctcgaccaggccattttggatgagccgccttcggttccc
tacgtggagtatccgaccgtcggcgatcgactgtactcgggcgtgtgcttcatgagttgg
aagcaagttgcctcccattacaccgcgcaagtcgtgtatttccatcgaatcagcgcctgc
ccggcaaacagcactcatctctatgccgcgacacgctgtacttgccagacgggttttgcc
gcaaagaacaacgcttgcgtgaagacgccaccgcgtgagcttcccaacatgtgcagagcc
ggagacccggcggggttcgtggcaggcaacccgattgtcccgatgacaggggacaagatc
gagagcgttacggactttgctgatcttggaccgtcgcctttgatgctgcagcgttcttat
cgaagcagtctcggtctcaatccagaccggtccgacagcggttttggacgagcctggact
ctcaaaggtggggcaagcctgacgcggtcttcttcggtgagtccagaggaagtcaccatc
gagttttccgccgggcatgtgcgaacgttccaagcgaacgggacaggcggatggtccgac
tcccgcaatccttcgagcacattgatgccaactgccggtggtggatggtcgtataaaagc
ggggatgatgacgtcacgctcaacttcaattccgcgggtaagttgctgagcacggtgccg
ccgaatgggtggatgacgacctacacctacaacgcgtcgggtcagctcgcaaccattgcg
aatgtttttggccgagtgctcaccttcagctacgacggaaatgggcaggttgcgtcagtc
acaacaccagatgcccgcgtcatcaactactcctacgatgcgaccaagcggctggcttcg
gtcacgtatccggatgcgaaggcggtgggctacctctatgaaagctcggcgtttcgctat
gcgttgacaggcatcaccgatgaagccggactgcggtacgccacattcgcatacgacggg
gcgggtaatgccatcagcacggaacatgcaggcggcgtaaatcgataccaagtcgtcaga
aacgcgactgatggggtggtcgttaacgccacggtgatcgatcctttgggtacgtcgcgc
agctatggctacgagcccttttcccctaagcccattgtttctacaagctcgcttccctct
ggcgatggggcgccgagttttgccaagcgcgagcaaagtctctctggagccgtgttgtcc
gaatacgagacggatttcaaggggaggctggcgagccgcacgacttgggatcaaacacgc
tggcttccggtttccatggatcgggacttgtatgccgatgagcctcagaccgtcaaaacc
gtttggcacgcgtcattccggttacctgttagcgtgactgaagtcggccgtttgaccaac
tattcctacgatgcgttgggcaacgtcttgtcgaagatcgttaccgacagagtgactcgc
aaagagcagacttgggaatggacctacaacactcagcaacttgtagccacagccaaggag
cccaacggtgcggtgacaagctacgcctacgacacccggggcaacatgctgacgtccacc
aacgccctgggccacgtcacaacctacagctatgacaacgccaaccgggtggccagcagc
acggctcctaacggactcgtcactacctacacttacgatgcccgtgatcgcttgctgacc
cagaccgttggaggtcaggccactacgatcacctataagcccttcggcactgtcgagacg
atcacgctacccaccagcctcgtcctcacctatgcctacgacgccgcccaccgcctgatc
ggctggagcaacaaccgaggcgaatttggcacctacaccctcgacggcatgggcaaccgc
accgccgagcagatcaaggacagcgcaggccaagtggcttggagcatggcccgcacggtc
aacaacatcaaccgcatctcgaagaaaaccgagggctcaaatcagaccagcacccttggc
tacgacgccaacggagaccttagctccgagagcaatggcctgaaccaaaccacgggctac
gaactggatgttctgcgccgggtcacgcgagttacgaatgctgccggtgatggggcttca
attcagtacaacccgctcaatgccgtgacgacgacttgggacttcaagaacgttgccacg
aactacaagcgcgatgcccagggcaacgccaccaccgaagccagcgccgacgtgggcagc
gccagtacccagtacgacaacctcggcctgcccagccagatcaccgacgccctgggccag
gccacaaccatcacccgcgatgcgctgggccgccccacaagcctcgtcttcgcagacggc
aagaccaccacgctgcgttacgacctcacggccaacagcaaggggtatctgtccgagatc
gtggaccgcagcggcaccaccgagtacacccgcgatgccttcggccgcgtcaccctcaag
aagcagaccctgatcaacggcagcgtgcagcaggtcagctacggctacaacgccaacggc
acgctggcgagcatcggctaccccaacggcgccacgctcacccacctgtacgacgccacc
ggccgccttgcgggcctgaactggaacggcaaccccctcgtcgcgggcatcgcctggaac
ccgctgggccagcccatcgcctggacctgggcctttgcgaaccctgccgtagccgccagc
cggacctacgacacagcgggacgcatgactgcaacggacttcagcagctacgtgtatgac
gccgctggccgcatcacgagcctgacgcagaacctgtaccagcccggcgataccgatccc
acgcacagcaccatctcgctggcgccgcagacgtggactgtgggctacaacaatgtcggg
cgcatcgtgagcttcaatgccacgggcaacaccgcaggctttggctacgacgccaatggc
aaccgaagcagcagcacccgggccgtcaacggcctgagcaccaaccgcacttacacggtg
ggcgcgtcgagcaaccaactgacgggcttcacccagagcatcaacggcgcgagcaacacc
agcgtcacctacggctacaacaccaatggcgacatggtgaccgatggcctgcgcagctac
acctacgacgctgaagggcgcctcggtgcatcgaccaccggcgccaccgatagcagcccg
accacgcgctacgcgcacaacgcgctggggcagcgggtgttcaagaccgagccgctgtat
ccgccgagccagggcaatgcggccgatccggggttcatgcagagcctgattgcgttcttc
accaagctgtggagcccgagcacaagccaagctgaacaactgggctacgcgtatgtctac
gacgagcagggcacgttgatcgcagaggtgggcagcgggggcacgaacagcgcggggcag
agccagtacatctacctgcccacggccaatgggccgatgccgattgcggccatcgtcaac
ggcaacacgttcgcggtgcacagcgatcacctgaacacgccgcgcaagctcacgaatgcg
gacgggcaagcggtctggcagtggagctacagcgcgttcggggaagacaagccgacgctg
gcgaggaaccggtttgccaatctggaggcgacaccgaatccgggcacgaccaacctctcc
gaggtgaggttcaacctgaggtatccggggcagtatgcggatgaggagtcggggttgttc
tacaacgggttcagaacatatgacccgagagttggtcgctatacgcagagcgatcccatc
ggtctcgaaggtgggtggaatcggttcggctacgttggtggaaatccgctgagctacgtt
gatcctgatggattgcaggcgttaccgaagacagttgaccccgcgccgcgcatgtttcct
cctgcggcgaatgatcctctttatcgcgcgggatcaggggcgatgcgaccggtgacggct
agcaatctcgcgatgatggcattcgcagctggcgtccttacttaccagatgtgcaatccg
gaggacaattgcgacagtaggcttgtcgccatatatcgcttgatggccgaagtcgaagga
cgattgaccgatctatatttcgacaagctcaatctgaaaatcaacgcgccccaaaaaccg
tccccttcgctgcctgctggatcaggcagttggaatggacatatccagcagttggaacaa
aagcaggggcagttacggagagcgattaccgacgcgcttgcgtcagggtgcaaggttcca
ccgtttgcttttcgtctggcctatgcttctcttccagatcgaatcttgtga
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