Variovorax sp. PAMC26660: H7F35_32540
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Entry
H7F35_32540 CDS
T10234
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
vaz Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vaz03029
]
H7F35_32540 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_32540 (bamA)
Mitochondrial biogenesis [BR:
vaz03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
H7F35_32540 (bamA)
Transporters [BR:
vaz02000
]
Other transporters
Pores ion channels [TC:
1
]
H7F35_32540 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
Fn3_arc
Motif
Other DBs
NCBI-ProteinID:
QNK67804
UniProt:
A0A7G8VI61
LinkDB
All DBs
Position
complement(6942217..6944688)
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AA seq
823 aa
AA seq
DB search
MNKNFSRFRLRSVAAVVASALAATAAWAVEPFTVRDIRVEGLQRVEAGTIFASLPLRVGD
TYSDERGSAAIRALFDLGLFKDVRIDVNGNVLVVIVEERPTIADVDFVGAKEFDKAALQK
ALREVGLTDGRPYDKALADRAEQELKRQYVSRSLYNAQVVTTVTPIERNRVNLTFTVTEG
DSARIREVHVVGNKAFSESTLLSLFDQDSGGYLSWYTKSNQYSRAKLTADLETLRSYYIT
RGYLEFRIESTQVAISPDRKDLTVTVNITEGEKFVVAGVKLDGNYLGRDDEFKSLITIKP
GEPYNGEQVTETTKAFNDYFGTFGYAFAKVQARPEIDRANNRVTLTLQAEPSRRVYVRRV
SVGGNNKTRDEVIRREFRQFEASWYDGDKIKLSRDRVDRLGFFTEVNVETQEVPGTPDQV
DLVINVAEKPTGSLQLGAGYSSSDKVALTFGISQENVFGSGNFLGVQVNTSKYNRTLSLT
TTDPYFTKDGISRTISVYHTTTRPYSTNIDGDYKLVNQGASIRFGVPFSEVDTVFFGVGL
ERYAFDPNKSTAFAGLTTPRSYLDYFGCKLNQTPLSNGFLPPTPAGWAVTGCSTDSVWGV
PLTVGWGRDSRDSALVPTTGVLQRANLELGIGGDMKYVKTNYQYQQFFAINKQYTFAING
EVGYAKALGGKVYPIFKNFYAGGLGSIRGFEQNSLGPRDVPLFGQTEGAALGGTKKAIFN
AEFSTPFPGAGNDRTLRLYSFFDIGNVFGSRAAGLTDAQWKAQKKLRASVGLGISWISPL
GPLRLAYAFPVMSQKEVLDPATGFVVIPKDRIQRLQFQIGTSF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacttcagtcgctttcgcctgcgtagcgttgccgcggtggttgccagcgcg
ctggcagccacggcagcttgggccgtcgagcccttcacggtacgcgacattcgcgtcgaa
ggcttgcaacgtgtcgaggccggtacgatcttcgcgtcgctgcctttgcgcgttggcgat
acctacagtgacgagcgcggttccgccgcgatccgcgcgctgttcgacctggggttgttc
aaggatgtgcgcatcgacgtgaacggcaacgtgctggtggtgatcgttgaagagcggccc
accattgcagacgtcgatttcgtcggcgctaaagaattcgacaaggcagcgctgcaaaag
gccttgcgcgaggtggggctgaccgatggccgcccgtacgacaaggccctggcggaccgc
gcagagcaggagctcaagcgccagtacgtgagccgcagcctctacaacgcgcaggtcgtg
accaccgtcacgccgatcgagcgcaatcgtgtcaacctgacgttcaccgtcaccgaaggc
gactcggcgcgcatccgtgaagtccacgtggtcggtaacaaggccttcagcgaatcgacg
ctgctcagcttgttcgaccaggacagcggcggttacctgagctggtataccaagtccaac
cagtactcgcgcgccaagctcaccgccgacctggaaacgctgcgctcgtactacatcacg
cgcggctacctcgagttccgcatcgaatcgacccaggttgccatttcgccggaccgcaag
gacctgacggtgacggtcaacatcaccgaaggcgagaagttcgtggtggcgggcgtcaag
ctcgatggcaactacctcggccgcgatgacgaattcaagtcgctgatcacgatcaagcca
ggcgagccctacaacggcgagcaggtcaccgagaccaccaaggccttcaacgactatttc
ggcactttcggctatgcgtttgccaaggtacaggcgcggcccgagatcgatcgcgccaat
aaccgcgtcacgttgacgctgcaggccgagccttcgcgccgcgtctatgtgcgccgcgtt
tccgttggcggcaacaacaagacgcgcgacgaagtgattcgccgcgagttccgccagttc
gaagcttcctggtatgacggcgacaagatcaagctctcgcgcgatcgcgtggaccgcctc
ggtttcttcaccgaagtgaacgtcgagacacaggaagtgccgggcacacccgaccaggtg
gacctggtcatcaatgtggccgaaaagccgactggcagccttcaactcggtgctggttat
tcgagctcggacaaggtggcgctgaccttcggtatctcgcaggagaacgtgttcggctca
ggcaatttcctgggcgtgcaggtcaacaccagcaagtacaaccgtacgctgtcgctgacc
acgaccgatccttacttcaccaaggacggcatctcgcgcacgatcagcgtttatcacacg
acgacccgcccgtactcgaccaacatcgatggcgactacaagctggtcaaccagggcgca
tccatccgctttggcgtgccgttcagcgaggtcgacacggtcttcttcggcgtcgggctc
gagcgctacgcgttcgatccgaacaagtcaacggcgttcgccgggctcacaacgccgcgg
tcttatctcgattacttcggctgcaagctgaatcagacccccttgtccaacggtttcctg
cccccgacgcctgctggctgggcggtcacgggttgctcgaccgacagtgtctggggtgta
ccgctgactgtgggttgggggcgtgacagccgtgacagcgcgctggttccgaccaccggg
gttctccagcgcgccaatctggaattggggattggcggtgacatgaagtatgtcaagacc
aactaccagtaccagcagttcttcgcgatcaacaagcagtacaccttcgcgatcaacggc
gaggtcggttacgccaaggcgcttggaggcaaggtttatccgatcttcaagaacttctat
gccggtggactgggttcgatccgcggctttgagcaaaactcgctgggcccgcgcgatgtg
ccactctttggtcaaaccgaaggtgcggcactgggcggtaccaagaaagccatcttcaac
gccgagttcagcacgccattcccgggcgccggcaacgaccgcaccctgcgcctgtactcg
ttcttcgacatcggcaacgtgttcggttcgcgcgctgccggcctgacggatgcgcaatgg
aaggcgcaaaagaaattgcgcgcctcggtcggtcttggcatcagctggatttcgccgctt
ggcccgctgcgcctggcttatgccttccccgtcatgtcccaaaaggaagtgctggaccct
gccaccggcttcgtcgtgatcccgaaggatagaattcagcgcctccaattccagatcgga
acgtctttctaa
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