Variovorax sp. PAMC26660: H7F35_32890
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Entry
H7F35_32890 CDS
T10234
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
vaz Variovorax sp. PAMC26660
Module
vaz_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_32890
01504 Antimicrobial resistance genes [BR:
vaz01504
]
H7F35_32890
Transporters [BR:
vaz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H7F35_32890
Antimicrobial resistance genes [BR:
vaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
H7F35_32890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QNK67867
UniProt:
A0A7G8VIC4
LinkDB
All DBs
Position
complement(7011518..7012768)
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AA seq
416 aa
AA seq
DB search
MSNNKQKLSSVARKGLWPAVTGVTALLAVAAAVLGMHSFKAEATAPVAAQQGTPVSVATV
ASSEINAWDEFSGRLEAVERVDVRSRVAGAVQSVHFREGALVKQGELLITIDPAPYAAEV
ERAEAQVASAQARQSFSRSEQERAKRLWDEQAIAQREYDERANAGREAEANLRAAQASLQ
TARLSLGYTQVRAPVSGRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVIT
RALKDLPSGSSARGQIDTIPVQMGTAGLDGTPFTGKLQLIDNQVDAKSGTVRVRASFDNK
DGSLIPGQFARIRMGQARNDTALLVSERAIGTDQNKKFVMVVGDDNKAVYREVALGASIN
GLRVVSKGLKAGDRIVVNGLQHIRPGALVAPQTVTMDAKADSKQQQPERVAEAAKS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacaagcaaaagctctcttccgttgcccgcaagggcctctggcccgctgtc
acgggcgtgaccgcactgctggccgtggcggccgccgtgctgggcatgcacagcttcaag
gccgaggccacggcaccggtcgctgcgcagcagggcacgccggtgtcggtcgccaccgtg
gcgtcgagcgagatcaatgcctgggacgagttctcgggccggctcgaagccgtcgagcgc
gtcgatgtgcgatctcgcgtggcgggggccgtgcagtcggtgcacttccgcgaaggcgcg
ttggtgaagcagggcgagttgctcatcaccatcgaccccgcgccgtacgcggccgaagtc
gagcgtgccgaagcgcaggtggcgtcggcgcaggcccgccagtcgttcagccgcagcgag
caggaacgcgccaagcgcctgtgggacgagcaggccattgcacagcgcgagtacgacgag
cgcgccaacgccggccgcgaagccgaagccaacctgcgcgccgcgcaagcctcgctgcag
accgcgcgcctgagcctgggctacacccaggtgcgggcacccgtgtccggccgcatcggc
aagctcgaagtgacagtgggcaacctggtggcggccggtcccggcgcgccggtgctgacc
acgctggtgtcggtgagcccgatctacgcgagcttcgacgctgacgagcaagtcatcacg
cgggccctgaaagacctgccgagcggctccagcgcgcgcggccagatcgacaccattccc
gtgcagatgggcaccgccggcctggacggcacgcccttcaccggcaagctgcaactgatc
gacaaccaggtcgatgccaagagcggcacggtgcgcgtgcgggcctcgttcgacaacaag
gacggctcgctcatccccggccagttcgcccgcatccgcatgggccaggcgcgcaacgac
accgccttgctggtgagcgaacgcgccatcggcaccgaccagaacaagaagttcgtgatg
gtcgtgggtgacgacaacaaggccgtctatcgcgaagtggcgctgggcgcttccatcaac
ggcctgcgcgtcgtgagcaagggcctgaaggcgggcgaccgcatcgtggtcaacggcctg
cagcacatccgcccgggtgcgctggtggcgccgcagaccgtgaccatggacgcgaaggcg
gacagcaagcaacaacaaccggaacgcgtggccgaggccgcgaagtcctga
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