Variovorax sp. PAMC26660: H7F35_34500
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Entry
H7F35_34500 CDS
T10234
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz02010
ABC transporters
vaz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H7F35_34500
03070 Bacterial secretion system
H7F35_34500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_34500
02044 Secretion system [BR:
vaz02044
]
H7F35_34500
Transporters [BR:
vaz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
H7F35_34500
Secretion system [BR:
vaz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H7F35_34500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
AAA_21
DUF87
NB-ARC
AAA_30
PRK
AAA_18
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QNK68163
UniProt:
A0A7G8VJ70
LinkDB
All DBs
Position
complement(7368462..7370633)
Genome browser
AA seq
723 aa
AA seq
DB search
MASLEALCIIARFHQVAADAALLAHQLGLTPSEAIDTATLLGAAKHLGLKAKSSRTTLER
LSLTPLPALAVLRDESGQERFVILAQCDAQRVLLQDLSASNGRPIIEPLEVFAAHWTGEL
ILITSRASLAGELAKFDFSWFIPSLVKHRKLLGEVLFISFILQLFALVSPLFFQVVMDKV
LVHRGLTTLDVLVIGLLVVVIFESLLNGLRSYVFSHTTNRIDVELGARLFRHLVQLPLAY
FQARRVGDSVARVRELENIRSFLTGNALTVLLDVVFSIVFVVVMLFYSVPLTLIVLMSMP
LYFGLSLAVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKATALEPAFGRRWDNQLAA
YVSASFRTQNLASWAHEGVNLIGKLVNAATLWYGAHLVMNNDLTVGQFVAFNMFAQRVSQ
PIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTAAQLPALKGRVTLDNLTFRYRPEA
APVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYSPEQGRLLVDGIDISLIDAAQL
RRQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLAGAHEFISELPEGYDTMVGE
QGASLSGGQRQRIAIARALFTHPRILIFDEATSALDYESEAIVQRNMAHICKGRTVFIIA
HRLSAVRRADRIIVMDKGRIVEGGTHESLLGRPKGIYAHLWAMQDGGLPTEGTGAGVGTG
AAV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctggaagcgctgtgcatcattgcgcgttttcaccaggtcgcagccgatgct
gcgcttcttgcgcatcaactgggcctgacaccctccgaggccatcgacaccgccacgctg
ctgggcgcagccaagcacctcggccttaaagccaagtcttcccgcacaacgctagagcgt
ctttccctgacaccactgcccgcgttggcggtcttgcgtgacgagtccggtcaggaacgc
ttcgtcatcctggcccagtgcgacgcgcagcgcgttctcttgcaagacctttctgcatcg
aatggtcgtcccatcatcgaacctctggaagtcttcgcagcacactggacgggcgagctc
atcctcatcaccagccgcgccagccttgcgggcgaactggccaagttcgacttctcctgg
ttcatccccagcctggtcaagcacaggaagctgctgggtgaagtgctcttcatctccttc
atcctgcagctgttcgcgttggtcagcccgctgttcttccaggtcgtgatggacaaggtg
ctggtgcaccgcggcctgaccacactggatgtgctggtcatcggcctgctggtggtcgtc
atcttcgagtcattgctcaacggccttcgcagctacgtcttcagccacaccaccaaccgc
atcgacgtcgaactcggtgcgcgcctgttccgccatctggtgcagctgcccctggcctac
ttccaggcaagacgcgtcggcgattccgtcgcccgcgtgcgcgagttggagaacatccgc
agcttcctgaccggcaacgcgctgaccgtgctgctggacgtcgtcttctccatcgtcttc
gtggtcgtcatgctgttctacagcgtgccgctgaccttgatcgtgctgatgagcatgccc
ctgtacttcggcctgagcctggcggtggtgcccatcctgcgcagccgcctggacgagaag
ttcgcacgtggcgccgagaaccaggccatgctggtggagaccgtcagcgccatccagacc
gtcaaggccacagcgctcgaaccggccttcgggcgccgctgggacaaccagctcgccgcg
tatgtctcggccagcttccggacccagaaccttgccagctgggcgcacgaaggcgtcaac
ctcatcggcaagctcgtcaatgccgccaccctctggtacggcgcgcacctcgtgatgaac
aacgacctcaccgtgggccagttcgtcgccttcaacatgttcgctcaacgcgtgtcgcaa
cccatcatgcgcatggcccagttgtggaccgacttccagcagaccggcatctccatggcg
cgcctgggcgacatcctgaacacccgtactgaagtacccccgagcacggcagcccaactg
ccagcgctcaagggccgcgtgacgctggacaacctgaccttccgctaccgccccgaagca
gcccccgtgctcaatggcgtcagcctggatgtccgccccggcgaagtcatcggcatcgtc
gggcgctcgggctccggcaagagcacgctgaccaagctcatccagcggctgtactccccc
gaacaaggacgcctgctggtcgacggcatcgacatcagcctgatcgatgcggcgcaactc
agaaggcaagtgggcgtggtgctgcaggagaacaccctgttcaaccgcagcgtgcgcgag
aacatcgccatcgtcgatccggccgcaccgctcgaggccatcatccatgcggcccaactg
gccggtgcccatgagttcatcagcgagttgcccgagggctacgacaccatggtcggcgaa
caaggcgccagtctctccggcggccagcgccagcgcatcgccattgcccgcgcgctcttc
acgcacccgcgcatcctgatcttcgatgaagccaccagcgcgctggactacgagagcgag
gccatcgtgcagcgcaacatggcgcacatctgcaagggccgcaccgtcttcatcattgcg
caccggctgagcgccgtgcggcgggccgaccggatcatcgtgatggacaagggacggatt
gtcgaaggcggcacgcacgagagcctgctgggccggcccaagggcatctatgcgcacctg
tgggcgatgcaggatgggggactgccgaccgaagggacaggagcaggtgtgggcacgggg
gctgcggtatga
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