Verrucomicrobia bacterium IMCC26134: IMCC26134_01140
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Entry
IMCC26134_01140 CDS
T03830
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vba
Verrucomicrobia bacterium IMCC26134
Pathway
vba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IMCC26134_01140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vba02000
]
IMCC26134_01140
Enzymes [BR:
vba01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
IMCC26134_01140
Transporters [BR:
vba02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IMCC26134_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_30
AAA
AAA_22
AAA_21
DEAD
AAA_29
Zeta_toxin
AAA_23
RsgA_GTPase
AAA_25
AAA_24
nSTAND1
nSTAND3
AAA_28
DO-GTPase2
SbcC_Walker_B
NTPase_1
AAA_5
NACHT
AAA_19
AAA_14
MMR_HSR1
cobW
NB-ARC
AAA_33
ATP-synt_ab
SRP54
RecA
MobB
Motif
Other DBs
NCBI-ProteinID:
AKC81729
UniProt:
A0A0E3YTC9
LinkDB
All DBs
Position
292249..294033
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AA seq
594 aa
AA seq
DB search
MSNASSSAESRSPTAFQRFLGLVRPQAGQIAFGVVLILLATAVTLPAPWIFKLVIDDALP
SKDVEKLGFLLALFAGLFVARALLTLWRNRVLQYAGMRVTCDMRIALFRHLQSLSLRYFD
ANQTGKVISRITQDTGELYGLTNNFLINLIADSVTVVGVLCFLYWVEWRLALAVTLVLPL
FVINYLHNRRKMKTEARLHRDNWDQVVGFVQERVAAARVVKSFGREEAEVDAFASGINAD
YFNFSRIVLRNTRLSVIADMLASLGGMIVLGLGGWFVIRGEMQVGTLVAFNAYIVYVFPP
IVRFVDLSTVFQRANAALENIFAIFDTRPEIADDLGKPALPAPARGEVEFVNVSFDYDLE
PPGRGRPRTLTEVSFTIPAGRMVAIVGPSGSGKTTLINLIARFYDPASGEVRVDGIDIRS
VSVGSLRSQIGIVLQDNVLFSGTLEDNIKYGRPDATREQILDAATVANAHEFIVKLPDGY
STVVGERGSKLSGGQRQRVAIARAILKDPRILIFDEATSALDTQSERLIQQAMERLMKGR
TTFVIAHRLSTIQMADTILVMDAGRLVESGRHEELVARGGLYSRLHALQFQEPV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgcttcttcctccgctgagtccaggtcgcccactgctttccagcgttttctc
ggccttgtgcgtccgcaggcggggcagatcgcgtttggtgtcgtgctgatcttgctggcg
acggcggtgaccttgcccgccccttggatttttaaactggtgatagatgacgccctgccg
tcgaaggacgtggagaagctgggctttttgctggcgctcttcgcgggtttgttcgtcgcg
cgggctctgctgaccctctggcgcaatcgcgtgctgcaatacgccgggatgcgggtgacg
tgcgacatgcgcatcgcgctcttccgtcatctgcaatcgctttcgctgcgctatttcgac
gccaaccagaccggcaaggtgatcagccgaatcacccaagacacgggcgaactctacggt
ctgacgaataacttcctcatcaacctcatcgccgattcggtgacggtggtcggggtgttg
tgtttcctttattgggtcgagtggcggcttgcgctggcggttacgctggtgctgcccctg
ttcgtgataaactacctccacaatcgtcgcaaaatgaagacggaggcgcgcctgcatcgc
gacaactgggaccaggtcgtcggcttcgtgcaggagcgggtggcggcggcgcgcgtcgtg
aaatccttcggccgcgaggaggccgaggtcgatgcctttgccagcggcatcaatgcggac
tactttaacttttcccgtattgtcctccgcaatacccgcctgagtgtgatcgccgacatg
ctcgcgtcgctgggcggtatgatcgtcctggggctcggcggctggttcgtcatccgtggc
gagatgcaggttggcactctggtggcttttaatgcctacatcgtctacgtcttcccgccc
atcgtgcgcttcgtggatttatcgactgtttttcagcgggcgaacgccgcgttggagaac
atctttgcgattttcgacacccggcccgagatcgcggacgatttggggaaacctgccctg
cccgctccggcgcgaggcgaggtggagttcgtaaacgtgagtttcgattacgacttggag
ccgcccggaaggggcagaccgcgcaccttgactgaagtgagcttcacgattcccgccggt
cggatggtcgccatcgtgggacccagcggctcgggcaagacgaccctcatcaacctgatc
gcacgcttctatgatcctgcttcgggcgaggtgcgggtggatggcatcgacattcggagc
gtatccgtcggctctttacgaagtcagatcggcatcgtgctgcaggataacgtgcttttt
tccggcacgctggaggacaatatcaaatacggtcgtcccgacgccacccgggagcagatc
cttgacgcggccacggtggcgaatgcgcatgagttcatcgtcaaactgcccgatggctat
tccaccgtggttggcgagcgaggctcgaagctatccggcggccagcgtcaacgcgtggcg
attgcccgggcgatcttgaaggatccgcgcatcttgatttttgacgaggcgacaagcgcg
ctcgacacccagtcggaacgcttgatccagcaggccatggaacggttgatgaaaggacgc
accaccttcgtcatcgcgcaccggttgagcacgattcagatggcggacaccattttggtg
atggatgcgggccgtttggtggaaagtggacggcatgaggagctggtggcgcgcggcggc
ctgtattcgcgtctgcacgccttgcagtttcaggagcccgtctag
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