Verrucomicrobia bacterium IMCC26134: IMCC26134_01925
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Entry
IMCC26134_01925 CDS
T03830
Name
(GenBank) helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vba
Verrucomicrobia bacterium IMCC26134
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vba03021
]
IMCC26134_01925
Transcription machinery [BR:
vba03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IMCC26134_01925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKC81840
LinkDB
All DBs
Position
complement(509595..512441)
Genome browser
AA seq
948 aa
AA seq
DB search
MSLGFVGQRCVSEREPELGLGLVAELDRTRITVEFPATRERRIYARGTPVLKQVRFGLGE
TVAARDGSALVIEEVVEEEGLLVYVGGGRRVREDVISDITSVGSPVERLLSGQADPLEVF
ELRQRTLLGQARIRQSEVRGFLGGRLELIPHQFYILHEVANRQIPRVLLADEVGLGKTIE
ACLILQRMLVTGRAKRALILVPEPLVHQWFVELLRRFNQWFTLFDEERCVTCEAADPGKN
PFLSAQLGLCAVGYLAGNAARAEQAVSAGWDIVIVDEAHHLGWTPEAASPEYALVEKLAA
KSPGLLLLTATPTQLGLEGHFARLRLLDPHRYNDLARYIADTERFGAVAGVAEKLIEGKK
LTAKDTAALREIFDRDAERLAELLAELAAGKEGAREDLVRTLLDQHGTGRVVFRNTRAAM
SGFPKRKYCPAPVAGATPTLLTRIARELEAEERGDISETRYAFKDDPRIDWLVAFLKKTS
PAKVLLICRSERKLLAIEAAVKDRVNFKIGLFHEGLPLVARDRQAAWFAEPDGAQLLLCS
EIGSEGRNFQFAHHLVLFDLPLNPGIVEQRIGRLDRIGQTETIRVHVPYVTGGADECVAE
WYHRGLGALETPLQAGDDYHAAFKDRLLALATGCVEGRGRTTPAQLDELVAETATFHAAL
AAKLKKGRDRLLELNSFDREVAERVLERVRAADADPFLKRFLGELFDHFGVRVKDHEEGD
VSLDANHAYVEGFPSIPRDGLLATYDRRRAIVREDIRFLSADHPLVQDTIDLLVDSPAGT
TAFCTLEAAKPNLLLEAVFVLESVSDARWQIDRFLAPTPVRVLLDIHGQDLTEDPDAEGW
MGDLEDAPLPRFLERPGFNAHLLKTMVETATEKAKTLAKTLKQNAREAAAEALTTELQRL
VDLGKVNDHVSPKEIDLARRQVLQTRTAIEQARLRLDSLRMIVAGTDL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaggttttgttggtcaacgttgcgtcagtgaacgtgaacccgagctcggtctc
gggctcgtcgcggagctggatcgcacccgcatcacagtcgagtttcccgccacccgcgag
agacgcatctacgcccggggcacgccggtgctgaagcaagttcgcttcggcctgggcgag
accgtcgcggcgcgcgacggctccgcgctcgtcatcgaggaggtcgtcgaggaggaaggc
ctgctggtttacgtcggaggcggccgccgggtgcgcgaagatgtgatctccgacatcacc
agcgtgggctctccggtcgagcggttgctctccggccaggccgacccgctggaggttttt
gaactgcgccagcgcacgctgctcggccaggcgcgcatccgccagtcggaggtgcgcggc
ttcctcggcggacggctggagctgatcccgcatcaattctacattctgcacgaggtggcc
aaccgccagatcccgcgcgtgctgctcgccgacgaagtcggcctgggtaaaaccatcgag
gcctgcttgatcctgcaacgcatgctcgtgaccggccgtgccaaacgcgcgctcatcctc
gtgccggaacccctggtgcaccagtggttcgtcgagctgctgcgacgcttcaaccagtgg
ttcacgcttttcgacgaagagcgctgcgtgacctgcgaggcggcggacccgggtaaaaat
ccattcctctccgcccagctcgggctttgcgcggtcggttatctcgccggcaacgccgcc
cgtgccgaacaggccgtgtccgccggctgggatatcgtgatcgtggatgaagcgcatcac
ctcggctggacgcccgaggccgccagccccgaatacgccctggtcgagaaactcgccgcc
aagagccccgggttgctgttgctcaccgccactccgacccaactcgggctcgaagggcac
ttcgcccgcctgcgcctgctcgatccccaccgctacaacgacctcgcgcgctacatcgcc
gacaccgaacgcttcggcgcggtcgcgggcgtggcggagaaactcatcgagggtaaaaag
ctcaccgccaaggataccgccgccctgcgggagatttttgaccgcgatgcggagcggctg
gccgagctgctcgccgaactcgccgccggcaaggagggcgctcgcgaggatctggtgcgg
acgctgctcgatcaacacggcaccggccgcgtcgttttccgcaacacccgcgcggccatg
agcggcttccccaagcgcaagtattgcccggctccggtcgcgggcgccacgcccacgctg
ctcacccgtatcgcccgcgaactcgaggccgaggagcgcggcgacatctcggagacacgc
tacgccttcaaggacgacccgcgcatcgactggctggtcgccttcctcaaaaaaacctcg
ccggccaaggtcctgctcatctgccgttctgaacgcaaactgctcgccatcgaagcggcg
gtgaaagaccgggtgaacttcaagatcggcctcttccacgaaggcctgccgctcgtggcg
cgcgaccgccaggcggcgtggttcgccgagccggacggcgcgcaattgctgctctgttcc
gagatcggcagtgagggccgcaacttccagtttgcccatcacctcgtgctcttcgacctg
ccgctcaaccccggcatcgtcgagcaacgcatcgggcggctagatcgcatcggccagacc
gagaccatccgcgtgcacgtcccctatgtcaccggcggcgcggacgaatgcgtcgccgag
tggtatcaccgcggcctcggcgcgctcgaaacgccactgcaggcgggcgacgattaccac
gccgccttcaaggaccgcctgctcgcgctcgccaccggttgcgtcgaaggacgcggccgc
accacgccggcgcagctcgacgagttggtggcggagacggcgaccttccacgccgcgctg
gcggcgaaattaaaaaaaggccgcgaccgtctgctcgagttaaactccttcgaccgcgaa
gtcgcggagcgggtgctcgagcgcgtgcgcgcggcggatgccgacccgttcttgaaacgc
ttcctcggagaactcttcgaccacttcggtgtgcgggtaaaggaccacgaagagggcgac
gtgtcgctggacgccaatcacgcctacgtcgagggcttcccgagcatcccgcgcgacggc
ctgctcgcgacctacgaccgccgccgcgccatcgtgcgcgaagacatccgcttcctctcc
gccgaccatccgctggtgcaggacacgattgatttgctggtggattcaccggcgggcact
acggcgttttgcacgctcgaggcggcgaagcccaaccttctgctcgaggcggttttcgtg
ctcgaatcggtgtcggatgcgcgctggcagatcgaccgctttctggcgccgacgccggtg
cgggtgctgctcgatatccacgggcaagacctgaccgaggaccccgatgccgagggctgg
atgggcgaccttgaagacgcgccgctgccacgcttcctggagcgcccgggctttaacgcc
cacctgttgaaaaccatggtcgagaccgcgaccgagaaggcaaagacgctcgccaagacg
ctcaagcaaaacgcccgcgaggcggcggcggaggcgctgacgacggagctgcaacgactg
gtcgatctcgggaaggtaaacgaccacgtgagccccaaggaaatcgatctcgcccgccgg
caggttttacagacccgcactgccatcgagcaggcgcgcctgcggctggactccctgcgc
atgatcgtggccggcactgacttgtga
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