Verrucomicrobia bacterium IMCC26134: IMCC26134_04395
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Entry
IMCC26134_04395 CDS
T03830
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vba
Verrucomicrobia bacterium IMCC26134
Pathway
vba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IMCC26134_04395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vba03400
]
IMCC26134_04395
DNA repair and recombination proteins [BR:
vba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IMCC26134_04395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AKC82208
LinkDB
All DBs
Position
complement(1190696..1193278)
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AA seq
860 aa
AA seq
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MSASSPSAAASPEPAPKLTPMLQQYFEVRRGLPKDTLLLFRLGDFYELFFDDAIDASRLL
GLTLTKRGDHPMAGLPFHAADGYVNKLLAAGRKVAICDQAEPAVAGKLVRRALTRILSPG
TTLDAKQLDASRNHYLAALHADRAGLHAAWLDLSTGDFRLASDPRPEDLLPVLTALDPRE
LVLPEGLLDKWRSAPHEQTALHALAAFAAGRTLTELPAFQFEPATGLRAVLSTLGVLNLE
GFGIPQDHTALGPAGALVLYVTENLCAKPENLHRLQLHRSAATLLLDPATLRNLEIFSST
RGERTGSLLSALSRTRTAPGARLLEAWLAAPPQDLDEIRRRSSAVGALLSAPGPLADLRS
ALANVRDIPRILGRLQNRLRNPRELGGIRDTLRQLPDLRLALESFDAPLHPFLAELRDFA
SLRLILDNALADELPADLADGNLIRPGHDAELDRLHALKTGNRAWLSELEAAEQARTGIR
SLKVKFTNNFGYYIEITKANLHLVPADYIRRQTTVNGERYVTDALRQKEKEILSADDNAL
AREHTLFAELVAAVLDDSLALAKTANALAELDVLAGWAELAREWDYCQPEFVDDAVLEIT
AGRHPVVEQMLRDPSRPAGSQAFVPNDTRLSATADQLALLTGPNMAGKSTYIRQIALIAL
MAHVGSWVPATTCRLGLVDRIFSRVGASDDLARGNSTFMVEMNETANILNHATDRSLIIL
DEIGRGTSTYDGLSIAWAVVEHLHADPERGPRTLFATHYQELTQLEKHLSRLRNYSVAVK
EWNDDIVFLRRVIPGPAERSFGIQVARLAGLPPSVIDRARAILAKLEGDETAVELPSSPV
AKPKKKLTVAPADTAQLELL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcgtccccctccgccgccgcatcccccgagcccgcccccaagctcaccccg
atgctccagcagtatttcgaggtgagacgcggcctgcccaaggacaccctcctgctgttc
cgcctcggcgatttctacgagttgttcttcgacgacgccatcgatgcctcgcgcctcctc
ggtctcaccctcaccaagcgcggcgaccaccccatggccggcctgcccttccacgccgcc
gacggctacgtcaacaaactcctcgccgccggccgcaaggtcgccatctgcgaccaggcc
gagcccgccgtcgccggcaaactcgtgcgccgcgccctcacccgcatcctctcccccggc
accaccctcgacgccaaacagctcgacgcctcgcgcaaccactacctcgccgccctccac
gccgaccgcgccggtctccacgccgcctggctcgatctctccaccggcgacttccgcctc
gcctccgatccgcgccccgaggacttgctccccgtcctcaccgccctcgacccccgagag
ctcgtcctgcccgagggcctgctcgataaatggcgctccgccccgcacgagcagaccgcc
ctccacgccctcgccgccttcgccgccggccgcaccctcaccgagctgcccgccttccag
ttcgagcccgccaccggtcttcgcgccgtcctctcgaccctcggcgtgctcaacctcgag
ggcttcggcatcccgcaggaccacaccgccctcggcccggccggcgccctcgtgctctac
gtcacggaaaacctctgcgccaaaccggagaacctacaccgcctccagctccaccgcagc
gccgccacgctcctcctcgatcccgccaccttgcgcaacctggagattttctcctccacg
cgcggcgagcgcaccggatccctcctctccgccctcagccgcacccgcaccgcccccggc
gcccgcctgctcgaggcctggctcgccgctccgccgcaagacctcgacgagatccgccga
cgcagctcggccgtcggcgccctgctctccgcccccggcccgctcgccgacctccgttcc
gccctcgcaaatgtccgcgacatcccgcgcatcctcggccgcctgcaaaaccgcctccgc
aacccgcgagaactcggcggcatccgcgacaccctccggcagctcccagatctgcgcttg
gccttggaatccttcgatgccccgctgcatcccttcctcgccgagcttcgtgactttgcg
tctttgcgtttaattctggataacgccctcgccgacgaactccccgccgacctcgccgac
ggcaacctcatccgccccggccatgacgccgagctcgaccgcctccacgccctcaagacc
ggcaaccgcgcctggctttccgagctcgaggccgccgagcaggcccgcaccggcatccgc
agcctcaaggtcaaattcaccaataatttcggatactacatcgagatcaccaaggccaac
ctccacctcgtccccgccgactacatccgccgccagaccaccgtgaacggcgagcgctac
gtcaccgacgccctccgtcagaaagaaaaagagatcctctccgccgacgacaacgccctc
gcccgcgaacacaccctcttcgccgagctcgtcgccgccgtgctcgacgactccctcgcc
ctcgccaagaccgccaacgccctcgccgaactcgacgtcctcgccggctgggccgagctc
gcccgcgagtgggattattgccagcccgagttcgtggacgacgccgttttggaaatcacc
gccggccgccaccccgtcgtcgagcagatgctccgcgatccctcccgccccgccggctcc
caggccttcgtgcccaacgacacccgcctctccgccaccgccgaccagctcgccctcctc
accggccccaacatggccggcaaatccacctacatccgccagatcgccctcatcgccctc
atggcccacgtcggcagctgggtgcccgccaccacctgccgcctcggcctggtggaccgc
atcttctcccgcgtcggcgccagcgacgacctcgcgcgcggcaactcgaccttcatggtc
gagatgaacgagaccgccaacatcctcaaccacgccaccgaccgctccctcatcatcctc
gacgagatcggccgcggcacctccacttacgacggcctctccatcgcctgggccgtcgtc
gagcacctccacgccgatcccgaacgcggcccccgcaccctcttcgccacccactaccag
gagttgacccagctcgaaaaacacctctcacgcctgcgcaactacagcgtggcggtgaag
gagtggaacgacgacatcgtcttcctccgtcgcgtcatccccggccccgccgagcgcagc
ttcggtatccaagtcgcccgcctcgccggcctgcccccgagcgtgatcgaccgagcccgc
gccatcctcgccaagctcgagggcgacgaaaccgcagtcgagctcccctcctccccggtg
gccaagcccaagaaaaaactcaccgtcgcccccgccgacaccgcgcagttggagttgctc
tga
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