Verrucomicrobia bacterium IMCC26134: IMCC26134_05430
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Entry
IMCC26134_05430 CDS
T03830
Name
(GenBank) ABC transporter permease
KO
K10559
rhamnose transport system substrate-binding protein
K10561
rhamnose transport system permease protein
Organism
vba
Verrucomicrobia bacterium IMCC26134
Pathway
vba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IMCC26134_05430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vba02000
]
IMCC26134_05430
Transporters [BR:
vba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
IMCC26134_05430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Bmp
PTH2
DUF5983
A6-like_Thioredoxin-like_C
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AKC83940
LinkDB
All DBs
Position
1474649..1476718
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AA seq
689 aa
AA seq
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MPNAEWVLLLVLLAEAVGFGLAHPRFLTLDNGFEIARLAAEVGLLAFGLTFVIKTGGIDL
SVGSMMGLTAVTLGGAWSLGLPIWLAALLAVALGGAGGALHGLLITRLRVPPLIVTLGTF
SLYRGLAEALTGGSVSYTGFPASFLALGQSYLAGWLPVQLVVVGLLFMLLWVLLQRTVFG
RELGVIGHNPGGARFAGVSVASVTTRAYVLCGACAALAGVIYVSRIGQAKADAGLGYELT
AIAAVVLGGTSINGGRGTLHGTLLGLLCLIVLQNGLRLAGQPSEIAGLLTGAVLIVAITA
SRFLFQSSARPAAADESLSNPDELTMKNSQLALLIAAILGGAALIAVSNVFLARSVTEAG
SAAVQSARSASLPASAGATSVAAAKPPAVRTVVALTPKAKADPYFVSCKQGADAAAAELG
VDLLWDAPTDPDPAKQTEIVEAWITRGVDVIAASCASPEALSSVLRKAQERGIKVISWDA
DAKSDARGFFVNQATAEGIGSTLADEGARLAGGKGRYAIITASLTDSNQNEWIKFIKARM
AAAYPGMELAAVQPSDGQRDKAMTEARNIVRAYPDVKVIIAVAAPAVPGAAEALKQENRR
DVKLTGLSVPSLCKSYVHDDWIQSIVLWNTQDLGYLTVRASAAVQDGTLKPGATSFSAGR
LGSLKVEGDQILLGKPFIFNAANIDGFNF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ctgcccaacgccgagtgggtgctactgctcgtgctgctcgccgaggcggtgggcttcggt
ctcgcccatccgcgttttctcacgctcgacaacgggtttgagatcgcacgtctcgccgcc
gaggtcggtctgctcgctttcggcctcacctttgtgatcaagactggcggcatcgacctc
tcggtcggctccatgatgggactgaccgccgtcaccctcggcggcgcgtggtccctcggg
ttgccaatctggctcgccgcgctgctagcggtcgcgctcggtggggcgggcggcgcgctg
cacggcctgctcatcacgcggctgcgggtgccgccgctcatcgtcaccctcggaaccttc
tccctctatcgcggcctcgccgaggcgctgaccggcggttcggtgagctacaccgggttc
cctgcctcgtttcttgctctcggccagtcctaccttgcggggtggttgccggtgcaactc
gtcgtggtcggcttgttgttcatgctcctctgggtgctgctgcagcgcactgttttcgga
cgcgaactcggcgtgatcggccacaaccccggcggtgctcgcttcgcgggtgtgagcgtc
gcctccgtcaccacgcgggcctacgtgctctgcggtgcctgtgcggcgctcgcgggcgtg
atctacgtctcccgcatcggtcaggccaaggccgacgcaggcctcggctacgagctcacc
gccatcgccgccgtcgtgctgggcggcacctcgatcaatggcggtcgtggcacgctgcat
ggcaccttgctcgggctgctctgcctcattgtgctgcaaaacggtcttcgcctcgccggc
cagcccagcgagatcgcaggtctgctgaccggcgccgtgctcattgtggccatcaccgcc
tcgcgctttcttttccaatcctccgctcgccccgccgctgcggacgaatcgctttcaaac
cccgacgaactcaccatgaaaaacagtcaactcgccctcctcatcgccgccatcctcggt
ggtgccgcgctcatcgccgtgagcaatgtcttcctcgcccgctccgtgaccgaggccggc
tccgctgccgtccagtccgcccgctccgcttcactgcctgcgtccgctggcgcgacctcc
gtcgccgccgccaagccccccgccgtgcgcacggtcgtggcgctcacgccgaaggcgaag
gccgacccctatttcgtgtcctgcaaacagggcgcggacgccgccgccgccgagctcggc
gttgatctactttgggatgcccccaccgatccggatccggccaagcagaccgagatcgtc
gaggcctggatcacacgcggcgtcgatgtgatcgcggcgagctgcgccagccccgaggcc
ctgtcctccgtgctgcgcaaggcgcaggaacgcggcatcaaggtcatctcgtgggacgcc
gacgcgaagagcgacgcccgcggctttttcgtcaaccaagccaccgccgaaggcatcggc
agcacgctggccgacgagggcgcccgcctcgccggaggcaagggacgctacgccatcatc
accgcctccctcaccgattcgaaccagaacgagtggatcaagttcatcaaggcccgcatg
gccgccgcctatcccggcatggagctggcggctgttcagccctctgacggccagcgtgac
aaggccatgaccgaggcccgcaacatcgtccgcgcctaccccgacgtgaaggtcatcatc
gccgtcgccgcccccgccgtccccggcgccgccgaggccctgaaacaggaaaaccgccgc
gacgtgaagctcaccggtctctccgtgcccagcctttgcaagagttacgtccacgacgac
tggatacagagcatcgtgctctggaatacccaggatctcggctacctcacggtgcgcgca
tccgccgcggtgcaggacggcaccttgaagcccggcgcgaccagcttctccgccggacgc
ctcggctccctgaaggtagagggcgaccagatcctcctcggcaagcccttcatttttaac
gccgccaacatcgacggctttaatttctaa
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