Verrucomicrobia bacterium IMCC26134: IMCC26134_06225
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Entry
IMCC26134_06225 CDS
T03830
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vba
Verrucomicrobia bacterium IMCC26134
Pathway
vba00540
Lipopolysaccharide biosynthesis
vba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IMCC26134_06225
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vba01005
]
IMCC26134_06225
Enzymes [BR:
vba01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
IMCC26134_06225
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
IMCC26134_06225
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
IMCC26134_06225
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
IMCC26134_06225
Lipopolysaccharide biosynthesis proteins [BR:
vba01005
]
Lipid A
IMCC26134_06225
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AKC82472
LinkDB
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Position
1666110..1667408
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AA seq
432 aa
AA seq
DB search
MLWLYRLLFLPAVLLAAPYYLLRMRRRGGYAEHFGQRFGATPSLPPKRAGVRRIWLQAVS
VGEMLAIAPLLEAWGRDEAVEVYLSTTTSTAYALASQRYAGRGTVIGLAYFPLDCWLCAR
RTWRAVEPDLVILTEGERWPEHLAQAAVRGVPVVAVNARLSDRSYRRMVKLGPWARLLTR
GLTRVLAASEGDAERFEKFGVPKKRITVTGNLKLDVELAVVPAGEQARFRSELGMGDSRI
LMGASTWPGEEAALLAAWRGLRATAAGREAKLLIVPRHAERRDEIEGLMIAEGVRYHLRS
KGAAAAPDGVDVAVADTTGELQYLLALAEVVFVGKSLPPHTEGQTPVEAAARGRAVVFGP
GTANFRVIAKELTDLGAARRVSDAEELSRVVVALWADNDSRAALGAAGRSWHEGNRGAAA
RTLMAITELMSR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctctggctctatcgcctgttatttctccctgccgtcctgctggcggcaccctattat
ctgctgcgtatgcggcggcgggggggctatgctgagcattttgggcagagattcggggcg
acgcccagcttgccgccaaaacgggcaggagttcgtcgaatctggctacaggccgtcagc
gtgggtgaaatgctggcgatcgcgcccttgctagaagcatggggacgggatgaagcggtc
gaagtttatctcagcactaccacaagcaccgcctatgctttggcttcgcaacgctatgct
gggcgggggacggtgattggtttggcgtattttccgctcgattgctggctctgcgccagg
cgcacctggagggcggtcgagccggatttggtaatattgaccgagggggaacgctggccg
gaacacctcgcacaggcggcagtgcgtggagtgccggtggtggcggtgaatgcgaggctt
tctgaccgcagctatcggcgcatggtcaagctcggcccatgggctcgcttgctcactcgc
ggtttgacccgagtgctggcggcgagcgagggcgatgcggagcggtttgaaaagtttggt
gtgccgaagaagcggatcacggtgacgggcaatcttaagttagacgtggagctcgccgtc
gtgcccgccggggagcaggcgaggtttcgatccgagctgggaatgggggattcgcgaata
ttgatgggcgcttcgacctggcccggcgaagaggctgccttgcttgcggcatggcgagga
ctgcgtgcgactgctgcgggacgtgaggcaaagcttttgattgtgccacgacacgctgaa
cgccgcgatgaaatcgagggactgatgattgcggagggggtgcgttatcaccttcgctcc
aagggggcggcagcggcaccggacggggtggatgtggcggtcgcggacactaccggcgag
ctccaataccttctggctctggccgaggtggtgttcgtgggcaaaagccttccgccgcat
acggaaggtcaaacaccggtcgaggcggccgcacgaggacgcgccgtggtgtttgggccc
ggcacggcaaactttcgtgtcatagcaaaagaactcaccgacctgggtgcggcacggcgc
gtgtcggatgccgaagagttgtcgcgagtggtggttgcactttgggcagataacgactcg
cgtgctgcactcggcgctgcgggccgatcctggcatgaaggaaatcgtggcgctgcggcg
cggactctcatggctattacagagctcatgagcagatag
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