Verrucomicrobia bacterium IMCC26134: IMCC26134_06735
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Entry
IMCC26134_06735 CDS
T03830
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vba
Verrucomicrobia bacterium IMCC26134
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vba03009
]
IMCC26134_06735
Enzymes [BR:
vba01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IMCC26134_06735
Ribosome biogenesis [BR:
vba03009
]
Prokaryotic type
ribosomal protein modification factors
IMCC26134_06735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AKC82545
UniProt:
A0A0E3UIF7
LinkDB
All DBs
Position
1818938..1820353
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AA seq
471 aa
AA seq
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MSVKVSLVSLGCAKNLVDSEIMVGHLHKAGMTVVPDQDKADVVIVNTCSFIDSSKEESIN
HILEAHATRGMKKRRAGQKLIVAGCMSQRFSKELPEALPEVDAFIGLDQLTTVGAIIDEL
TGTVRAKGEAPVNFVQGRSTYIPDYDTPRFRLTPKHFAYIKIAEGCNHPCTFCIIPQIRG
RHRSRTVESVVAEARQLVAEGVKEINLISQDTTYFGMDTWEQRPNPRTPVDSSRGTALTT
LLRQLNAIEGNFWIRLLYTHPAHWSDELIKTIAECPKVARYIDIPLQHISDHMLGRMQRE
TSGDYIRDLIARIRAGIPGIAVRTTFIVGFPGETEADVDELCEFIREAKFERLGVFRYSA
EDGTRAAKMDEQLTVKVKEARWHKTMALQQEIAAEVSKSYVGKTIRVLVEEPGVARGEAD
APDIDGRVYVPRSLPVGEFADVTITDFRDYDLLALPKGQKPKEFKVAKQAQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaaagtcagtctcgtttccctcggttgcgccaaaaatctcgtcgatagcgag
atcatggtcggccatcttcacaaggccggcatgaccgtggttcccgatcaagataaagcc
gacgtcgtcatcgttaacacctgttcctttatcgattcctcaaaagaggagtccatcaac
catatccttgaggcccacgccacccgcggcatgaagaaacgccgcgccggccagaagctg
atcgtcgccggttgcatgtcccagcgtttctcgaaggaactccccgaagccctgcccgag
gtggatgccttcatcggtctcgaccagctcaccaccgtgggcgccatcatcgacgagctc
accggcaccgtgcgggccaagggcgaagccccggtgaattttgtccaaggtcgctccacc
tacatacccgattacgacacgccccgcttccgtcttacccccaagcatttcgcctacatc
aagatcgccgagggctgcaaccacccctgcaccttttgcatcatcccgcagatccgcgga
cgccaccgctcccgcaccgtcgagagtgtcgtcgccgaggcccgccaactggtcgccgaa
ggggtgaaagagatcaatctcatcagccaggacaccacctactttggcatggacacctgg
gagcaacgacccaacccgcgcacccccgtcgattcgtcgcgcggcaccgccctgactacc
ctcctccgtcagctcaacgccatcgaggggaatttctggatacgcctgctctacacccac
cccgcccattggtccgacgaactcatcaagaccatcgccgagtgccccaaggtcgcccgc
tacatcgacattccccttcaacacattagcgaccacatgctcggccgcatgcaacgcgag
accagcggtgactacatccgcgacctcatcgcccgcattcgcgccggcatcccgggcatc
gcggtgcgcaccaccttcatcgtcggcttccccggcgaaaccgaggcggacgtcgatgag
ttgtgtgaattcattcgcgaggcgaagttcgaacgcctcggcgtgtttcgctactccgcc
gaggacggcacccgcgccgccaagatggacgagcaacttaccgtgaaggtgaaagaagcc
cgttggcacaagaccatggcgctccagcaggagatcgctgccgaggtcagtaaatcctat
gttggtaaaaccattcgcgtgcttgtcgaagaacccggcgtcgcccgcggtgaggcggat
gcacccgatatcgacgggcgcgtttacgtgccgcgcagcctgcccgtcggagagttcgcc
gacgtcaccataaccgactttcgcgactatgatttgctcgccttgcccaagggccagaag
cccaaggaattcaaggtcgccaaacaggcccagtaa
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