Verrucomicrobia bacterium IMCC26134: IMCC26134_09390
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Entry
IMCC26134_09390 CDS
T03830
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vba
Verrucomicrobia bacterium IMCC26134
Pathway
vba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMCC26134_09390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vba03400
]
IMCC26134_09390
Enzymes [BR:
vba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC26134_09390
DNA repair and recombination proteins [BR:
vba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IMCC26134_09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
PriA_C
Zn_ribbon_PriA
ResIII
AAA_30
RecA
RUBY_RBDX
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKC82935
UniProt:
A0A0E3UIV7
LinkDB
All DBs
Position
complement(2477860..2480130)
Genome browser
AA seq
756 aa
AA seq
DB search
MTETVGVHPLAGFDKLLHYKVPESLRAQLQVGSLVRIPIVNRFHLGIVAEFSAPKDFPVE
RCKPLAGLVYPFPALPPDLLRLAHWMSAYYAAGLDAIIEAMLPVAVRKAAALKQEKLLAP
AVPPGLPGAPTDDEIAALAKRAPAQAKVFAFLLSQPRPVAKSLVLDRLTVTAAAINGLIN
RGWVREQTRRVERIAYDDAHSAGEHVAAQPHRLNSEQQAAVDVLTPLLSAAQPKFGVQLL
FGVTGSGKTEVYLRAIQTALAAGGGVAFLVPEVALTPQTVARLRSRLEAIAPGHRCVVWH
SHLSEGERLDGWLALATGEARVVVGARSAVFAPVQDLRLIVVDEEHEPAYKQDETPRYHG
RDTAIMRAKLAGALCLLGSATPSLETWANASSGKYGLLKLTQRIDDRKLPFIDIVDMRVE
CMQQRGPATLSKRLVEGMRARISRGEQTILFINRRGYSSAMQCRKCGHVEECPHCSVSMT
YHRADETLRCHLCGQQGNAPSRCPSCGAPDIKWRGTGTQRVEEAVRRVLPNARLERIDSD
TMAKKHRFREILGDFRAGKIDILVGTQMIAKGLDFPNVTLVGLVDADLSMHVPDFRANER
TFQLLVQVAGRSGRGDRAGEVVVQTFTPEAGAIQFSRHADFTGFAETEIKMRREFGYPPA
RHLLHHLFRGPNPEKLQFFAEQWKNRVAAALGEKVTLAGPAAAPIEKIKDEYRWQLWYFC
NAPVTGIVAELGKLRADFAWPEDMVQVLDVDPVNLC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacggtcggcgtgcatccactcgcggggttcgacaagcttctgcactacaaa
gtgccggagtcgctccgcgcgcagttgcaggtcggctcgctggtgcgcatcccgatcgtg
aatcgctttcacctcggcatcgtggccgagttcagcgcgcccaaggattttccggtggag
cgctgcaagccgctcgccgggctcgtctaccctttcccggcgctgcctccggatttactg
cgccttgcccactggatgagcgcctactacgcggccgggctggatgccatcatcgaggcc
atgctgccggtcgcggtgcgcaaggccgccgctttgaaacaggaaaaactcctcgcgccc
gccgtgccgcccggcctgccgggggcgccgacggacgacgagatcgccgcgctcgcaaag
cgcgccccggcgcaggccaaggtgtttgcgtttctcctctcgcaaccgcgccccgtcgcg
aaatcgctcgtgctcgaccgcctcacggtcaccgccgccgcgatcaacggtctgatcaac
cgcggctgggtgcgcgagcagacgcgccgcgtcgagcgcatcgcctacgacgacgctcat
tcggccggggaacacgtcgcggcgcagccgcaccggctcaacagcgagcaacaggcggcg
gtggacgtgctcacgccgctgctctcggcggcgcagccgaagttcggcgtgcagctgctc
ttcggggtgactggttcgggcaaaaccgaggtctatctgcgcgccatccagaccgcgctc
gcggccggcggcggcgtggcgtttctcgtgcccgaggtcgcgctcacgccgcagacggtg
gcgcgtttacgcagccggctcgaggccatcgcgccggggcaccgctgcgtggtgtggcac
agtcatttgagtgaaggcgaacggctcgacggctggctcgcgctcgcgaccggcgaggcg
cgcgtggtcgtgggcgcgcgctcggcggtcttcgctccggtgcaggatctgcggctgatc
gtggtggatgaggaacacgagcccgcctacaaacaggacgagacgccgcgctaccacggc
cgcgacaccgccatcatgcgcgccaagctggccggcgcgctctgcctgctcggctccgcc
acgccctcgctcgaaacctgggccaacgcctcctcgggcaaatacggcctgctcaaactc
acccagcggatcgacgaccgtaaactccccttcatcgacatcgtggacatgcgggtggag
tgcatgcagcagcgcggcccggccaccctttccaagcgcctcgtcgagggcatgcgcgcg
cgcatctcgcgcggcgagcagacgatcctgtttatcaaccgccgcggctactcctcggcg
atgcagtgccgcaagtgcggccatgtggaggagtgtccgcattgcagtgtgtcgatgacc
taccaccgcgccgacgagacgctgcgttgccacctgtgcggccagcagggcaacgcgcct
tcacgctgcccgtcctgcggcgcgccggacatcaagtggcgtggcacgggcacgcagcgc
gtcgaggaggcggtccgccgggtgctgccgaatgcgcggctcgagcgcatcgactcggac
acgatggcgaaaaaacaccgcttccgcgagatcctgggcgacttccgcgcgggtaaaatc
gatatcctggtcggcacgcagatgatcgcgaaggggctcgatttcccgaacgtgacgctg
gtggggctggtggacgccgacctctcgatgcacgtgccggactttcgcgccaacgagcga
acctttcagctcctcgtgcaagtcgcgggccgttcgggccgtggcgaccgggcgggcgag
gtggtggtgcagacctttacgcccgaggccggggcgatccagttttcgcggcacgcggac
ttcaccgggtttgccgagacggagatcaagatgcggcgcgagttcggttacccgccggcg
cggcatttgttgcaccacctctttcgcggaccgaatccggaaaagctgcagttcttcgcc
gagcagtggaaaaaccgggtggcggcggcgctgggcgagaaagtgacgctggcgggaccg
gcggcggccccgatcgagaagatcaaggacgagtatcgctggcagctctggtatttctgc
aacgccccggtgacgggcattgtggccgagctaggcaagctcagggctgacttcgcctgg
cccgaagacatggtgcaggttctggacgtggacccggtgaacttgtgctga
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