Victivallales bacterium CCUG 44730: C5Q97_06340
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Entry
C5Q97_06340 CDS
T05502
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vbc
Victivallales bacterium CCUG 44730
Pathway
vbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C5Q97_06340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbc03400
]
C5Q97_06340
Enzymes [BR:
vbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C5Q97_06340
DNA repair and recombination proteins [BR:
vbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C5Q97_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVM44353
LinkDB
All DBs
Position
1532785..1536300
Genome browser
AA seq
1171 aa
AA seq
DB search
MNERPDYLDYRLDGWNLIEAAAGTGKTYTIQNLAVRFLLERRLPIRSLLVVTFTEAAAAE
LKERIRAVLGTMLDAATGAEPASERERLLLERAAEAGVPREACAGLLKNALSSFDDAAIS
TIHGFCARVLGENAFESGVLFRSELVKDTSGMIAELGMDFYRRIFYAPGPKLRNAMAEAA
EITPESLTGPAKLKAAHPELVIRTPLAGTEEEAELILREAESIISELQNADLAGALAEAA
PYLNKLGNFAAADAPAAAEAALRKPDTAEALKCLSGLGLSVLETKVKKRLKGTTPEEVKA
RLAAGPFRLADRLAELVRDYGNALKLAAAAFIRHGFEQRRKRENFQTFNDLLQEVHHALH
AASSPLPAVLRQRYPVGIVDEFQDTDPVQYEIFTSIFRPPEGTLYMVGDPRQAIYAFRGG
DIAVYRRAVRELEAAGGRKYTLTANYRSAAAMIADVNTLFHRHADPFADPSITFPEVRAP
EPAPALLRNGVPEAHPLRIIRLPDANEAECRSRTARAVLELLSDPSLALPGRGESGIRPR
DIAILVLRGYEAELLAAELHALHIPAVFTRTGNIFDSEDARELLIVLRAVASNDVRRLPN
LLATPIGGMPVAAIAELQTERGERELAEEQTKLRELQTIWENGSFIEFFNALLTARQVRK
RYPALPRGERKLTNLLQLGDLLEQESARRGLSPAGVADFLAERIADPDKGDGEEYQQLLE
TDREAVTLMTIHGSKGLEFPIVLLPGLHLGDAEKRAELFHNAGGKLEYDLTDSPEGKRKA
QDERLQELLRLAYVAVTRAKHHCRIFWGKGPKATAPDWLFRMREAGARGTSPVQALLADP
PEPQIPAELLDPETAPEPPPFYRQDPGATLELELPPVRLGIDSGWQFVSYSSLSPQGGAD
TPYDYDEKEQEPGTPGEPPDGGIFAVRGGAAAGNAWHRIFELADFSAGEEELRTLALPQL
TDFGLLRGGEDPEEKLKLTVRMAQDVFRSPLRGADGVAFRLAEVPRRERLSELEFAYRFR
SGFTTKQLRRLLERYAAERFGLCEWPVWNRTVSGGCLNGFIDLFFRHHGRYFILDWKSNR
LGGRSANFLPERLPAAMAGSFYFLQYLIYTVAAVKYLRMRLGRFDEAEYESLFGGVFYLF
VRGVSPDHPGRGVFHDKPPYELVRQLEELIG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagcgccccgattacctcgattaccgtctcgacggctggaacctcatcgaagcc
gccgcgggaaccggaaaaacctatacgatccagaatcttgcggtccgtttcctgctcgag
cggcggctgccgatccgctcgctgctggtcgtgaccttcaccgaggccgccgccgccgaa
ttgaaggaacgcatccgcgcggtgctcggcacgatgctcgacgccgcgaccggagcggag
ccggcctcggagcgcgaacggctgcttctggagcgggcggccgaagcaggcgtgccgcgc
gaagcgtgcgccgggctgctgaaaaacgccctgagcagcttcgacgatgcagcgatctcg
accatccacggcttctgcgcccgggtgctcggcgagaacgcattcgagagcggcgtcctc
ttccgcagcgaactcgtgaaagacacttccggcatgatcgcggaactcggcatggacttc
taccgccgcatcttctacgcgcccggcccgaagctccggaacgcaatggccgaagcggcc
gaaatcacgccggaaagcctgaccgggccggcaaaactgaaagccgcacacccggagctc
gtgatccggaccccgctcgccggaacggaagaggaagcggaactcattctgcgggaggcg
gaatcgatcatttccgagctgcaaaacgccgatctggcgggcgcactggccgaagcggct
ccttatctgaacaaactcggcaattttgcagcggccgacgcacccgccgcggcggaggcg
gcgctgcggaaacccgatacggcggaggccctcaaatgcctgtccggtctcggactgtcg
gttctcgaaactaaagtgaagaaacggctgaagggaacgacgccggaggaggtgaaagcg
cgcctcgccgccggaccgttccggctggcggaccggctggcggagctggtccgcgactac
ggcaacgcgctgaaactcgcggcggccgccttcatccgccacggcttcgagcagcgccgc
aaacgggaaaacttccagactttcaacgacttgcttcaggaagtgcaccatgcgctccac
gctgcttcaagtccgcttcccgccgtgctgcggcaacgctatccggtcggaatcgtcgac
gaatttcaggacaccgatccggtccagtatgaaatcttcacctcgatcttccgcccgccg
gagggaacgctttatatggtcggcgacccgaggcaggcgatttacgcgttccgcggcggc
gacatcgcggtctaccgccgcgccgtccgcgagctcgaagccgccggagggagaaaatat
acgctgacggccaactaccgttccgccgcggccatgatcgccgacgtcaacacgctgttc
caccggcacgccgatccgttcgccgatccgtccatcacgttcccggaggttcgcgcgccg
gaaccggccccggcgctgctccggaacggagtgcccgaagcgcacccgctgcggatcatc
cgccttcccgatgcaaacgaggcggagtgccgcagccggaccgcccgcgccgtgctcgag
ctgctcagcgacccctcgctcgctctgccggggcgcggcgaatccggcatccgtccgcgc
gacatcgcgattctcgtccttcgcggctacgaggcggaactgcttgcggcggagctgcac
gcgctgcatattccggccgtgttcacccggaccgggaacatcttcgactcggaagacgcg
cgcgaactcctgatcgtcctccgcgccgtagcgtcgaacgacgtgcgccggctgccgaac
ctgctggccaccccgatcggcggcatgccggtcgcggcgatcgcggagctccagaccgaa
cgcggcgagcgggagctcgcggaggaacagacgaagctgcgcgaactgcagacgatctgg
gagaacggcagcttcatcgaatttttcaatgcgctcctcacggcgcggcaggtgcgcaag
cgttatccggccctgccgcgcggcgaacggaagctgaccaacctcctgcagctcggcgac
ctgctcgagcaggagtcggcccggcgcgggctctccccggccggagtcgccgactttctg
gctgaacggatcgccgatccggacaaaggcgacggcgaggagtatcagcagcttctcgaa
accgaccgcgaagcggttacgctgatgacgatccacggcagcaagggactcgaatttccg
atcgtcctcctgcccgggctccatctcggcgatgcggagaagcgcgcggagctgttccac
aacgccggcggaaagctagaatacgatctcaccgattcgccggagggaaagcggaaagcg
caggacgaacggctgcaggagcttctgcgcctcgcctacgtcgccgtgacccgggcgaaa
caccactgccgcattttctgggggaaagggccgaaggcgacagcgcccgactggctgttc
cgcatgcgcgaagcgggggcccggggaacttccccggttcaggcgctcctcgccgacccg
cccgagccgcagatcccggccgaactcctcgacccggagacggcgcccgaaccgccgccg
ttttaccggcaggacccgggcgcgacgcttgagcttgagctgccgccggtccggctcggc
atcgactccggctggcagttcgtcagctactcgagcctgagtccgcagggaggcgccgac
actccatatgattatgacgaaaaggagcaggaacccggcacacccggagaaccgcccgac
ggcggcatcttcgccgtccgcggcggagcggcggcgggcaacgcctggcaccggatcttc
gaactcgccgacttcagcgccggggaggaggagctccgcacgctcgcgctgccgcagctg
accgatttcgggctgctgcgcggcggcgaagatccggaggaaaagctcaagcttacggtc
cgaatggcgcaggatgtgttccgttccccgctccgcggcgcggacggcgtcgcgttccgc
ctcgcggaagtgccgcggcgcgaacggctctccgagctggagttcgcctaccgcttccgc
tccggtttcacaacgaagcagctccggagactgcttgagcgctatgcggccgagcggttc
ggcctctgcgagtggccggtctggaaccgtaccgtctcgggcggctgcctgaacggattc
atcgacctcttcttccgccaccacggacgttatttcattctcgactggaagtcgaaccgg
ctgggcggcaggagtgcgaacttcctgccggagcggctgcccgccgcaatggccgggagc
ttctattttcttcagtacctgatctatacggtcgccgcggtcaaatatctgcgcatgcgc
ctcggccgcttcgacgaggccgaatacgagtcgctgttcggaggagttttctatctcttc
gtccgcggcgtgtcgccggaccatccgggccgcggcgtctttcacgacaaaccgccgtac
gaacttgtgcgccaactcgaggagctgatcggatga
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