Victivallales bacterium CCUG 44730: C5Q97_08045
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Entry
C5Q97_08045 CDS
T05502
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
vbc
Victivallales bacterium CCUG 44730
Pathway
vbc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C5Q97_08045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vbc03021
]
C5Q97_08045
Transcription machinery [BR:
vbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C5Q97_08045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
DUF722
Sigma70_r4_2
DUF6222
Motif
Other DBs
NCBI-ProteinID:
AVM44669
LinkDB
All DBs
Position
complement(1944784..1945656)
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AA seq
290 aa
AA seq
DB search
MRCSRSIRARSIPSNREFSGEAPETEVPEDSPHILRKARSEMEENTGTKQETEEERVNAL
IEQNLRLVQKIANDFLGRGLSWEDLVSEGNRGLITAAHKFDPSRGARFSTYSAWWIKQAI
RQAIAEQARTVRVPIGTQINWRRIRKVAKELTEKLGREPTDEEVAAEAKLPVATIQRLRS
SNQVEVHSLNAPVSGEESESGEFMEFVYDETAPGPDQELINLEDVEQLLALLETLPEREK
QVLRLRFGLDGEPVRTLEEVGAIIGCTNERVRQIQNQALRKLQQQIIKMK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgctcgaggagtataagggcacgctcgattccatctaaccgggagttttcagga
gaggcgccggagacggaggttccggaagattccccgcatatactcaggaaagcgaggtcg
gaaatggaggagaataccggcacgaagcaggagactgaggaagagcgcgtcaatgcgctc
atcgagcagaatctcagactggtgcagaagattgcgaacgactttctcgggcgcggcctg
tcctgggaggacctggtttcggaggggaaccgcggtttgatcaccgcggcccataagttt
gatccgtcgcgcggtgcgcgtttcagcacgtacagcgcgtggtggatcaaacaggcgatc
cgccaggcgatcgccgagcaggcccgcacggtgcgggttccgatcggcacgcagatcaac
tggcggcgaatccgcaaagtggcgaaggagctgaccgaaaagctcgggcgcgaaccgact
gacgaggaggtggccgcggaggcgaagcttccggtcgcgacgatccagcggctgcgcagc
agcaaccaggtcgaggtccattcgctgaatgcgccggtctccggagaggagtccgagagc
ggcgaattcatggagttcgtctatgatgagaccgcaccgggcccggaccaggaactgatc
aacctcgaggacgtcgagcagctgctcgcgctgctcgagacgctgccggagcgcgagaag
caggtgcttcgcctgcggttcgggctcgacggcgaaccggtccgcacgctcgaagaagtc
ggcgccatcatcggctgcacgaacgagcgggtccgccagattcagaatcaggcgctgcgg
aagctgcagcagcagatcataaaaatgaagtga
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