Victivallales bacterium CCUG 44730: C5Q97_15900
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Entry
C5Q97_15900 CDS
T05502
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vbc
Victivallales bacterium CCUG 44730
Pathway
vbc00521
Streptomycin biosynthesis
vbc00523
Polyketide sugar unit biosynthesis
vbc00525
Acarbose and validamycin biosynthesis
vbc00541
Biosynthesis of various nucleotide sugars
vbc01100
Metabolic pathways
vbc01110
Biosynthesis of secondary metabolites
vbc01250
Biosynthesis of nucleotide sugars
Module
vbc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C5Q97_15900 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C5Q97_15900 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C5Q97_15900 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C5Q97_15900 (rfbB)
00525 Acarbose and validamycin biosynthesis
C5Q97_15900 (rfbB)
Enzymes [BR:
vbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C5Q97_15900 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AVM47281
UniProt:
A0A2S0L1V8
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Position
complement(3877295..3878368)
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AA seq
357 aa
AA seq
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MKKIIVTGGAGFIGSAVVRSIIGNTADAVCVIDKLTYAGNLESLAEVSADPRYRFEQADI
CDRRALDRIFTDFRPDIVMHLAAESHVDRSIDGPGEFIQTNIVGTYTLLETARSYFDTLS
EEAKREFRFHHISTDEVYGDLEGPEDFFRESTPYAPSSPYSASKAASDHLVRAWKRTFRL
PTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGTGAQIRDWLYVEDHARALYLVA
TRGVPGETYNIGGHNEKKNIEVVETICALLDELRPRGDGRSYREQITFVADRPGHDLRYA
IDAAKIGRELGWKPQETFDSGIRKTVVWYLANKDGWCRRVQDGSYSRERLGLGGKGR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcatcgtaaccggaggagccggtttcatcggttcggcagtggtccgatcc
atcatcggcaataccgccgacgccgtgtgcgtgattgacaagctaacctacgccggcaac
ctcgaatcgctggcggaagtctccgccgatccgcgttaccgcttcgaacaggccgatatc
tgcgaccgcagggcgctggaccggatcttcacggatttccggcccgacatcgtcatgcat
ctcgccgccgaatcgcacgtcgaccgttcgatcgacggccccggcgaattcatccagacc
aacatcgtcggaacctatacgctgctcgagacggcccggagttatttcgatacgctctcc
gaagaggcgaaacgggagttccgtttccaccacatctcgacggacgaggtttacggcgac
cttgaggggccggaggatttcttccgcgaaagcacgccatacgctccgtcgtcgccctat
tcggccagcaaggcggccagcgaccatctggtccgggcctggaaacgcactttccggctg
ccgacgatcgtgacgaactgctccaacaactacggcccttaccacttccccgaaaagctc
attccgctcgtgattctgaatgccctcgacggaaaaccgctgccggtctacggaaccgga
gcgcagatccgcgactggctctatgtggaggaccacgcccgcgccctctatctcgtggcg
acgcgcggcgttccgggcgaaacctacaacatcggcggccacaacgaaaagaagaacatc
gaggtggtcgaaaccatctgcgcactgctcgacgaactgcgtccccgcggcgacggcagg
tcctaccgcgaacagatcaccttcgtggccgaccggcccgggcatgatctgcgctacgcg
atcgacgccgccaaaatcggccgcgagctcggctggaagccgcaggagaccttcgacagc
ggcatccgcaaaaccgtggtgtggtacctggccaacaaagacggctggtgcagacgcgtg
caggacggctcctactcccgcgaacggctcggcctgggagggaaaggacgatga
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