Victivallales bacterium CCUG 44730: C5Q97_21360
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Entry
C5Q97_21360 CDS
T05502
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vbc
Victivallales bacterium CCUG 44730
Pathway
vbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5Q97_21360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbc03019
]
C5Q97_21360
Enzymes [BR:
vbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C5Q97_21360
Messenger RNA biogenesis [BR:
vbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C5Q97_21360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AVM47129
UniProt:
A0A2S0L1J2
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All DBs
Position
5208890..5210149
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AA seq
419 aa
AA seq
DB search
MKHDLPVAPHVVDLISELQNAGYEAYIVGGAIRDLLLGRKPKDFDISTSATPEEVRAVFG
RRIARIIGKRFRLVHVEYSGELFEVSTFRRAPTRTAANSKKELPENLILSDNSFGTAEED
AWRRDFTVNALFYDPVNSELLDYTGQGIDDIRNRVVRAIGDPKLRFEEDPVRMLRALKLI
GQYDFTMDAATENALFSELELIRVAAPSRLALELEKILSSAYGDKHFQAFHDYGLLPYFL
PELNAAWDTPHGDYALNLLNERNCRVREGLYRNSVSLAMAALALPFVELECGGKPGDLWN
PGPDSTAAIRGVLDRLFKPQTMMNRMTMSAERVLILQSLFRDEKAKPRLIEAKSYPHARE
LMLLRLSVAEDDTAEAEKLWPAAVPRRRISAAKREDAERSPRRRRRRGPRKEKEKSQEA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgatttaccggtcgcgccccatgtcgtcgatctgatttccgaactccagaac
gccggatacgaagcttatatcgtcggcggggcgatccgcgatctgctgctcgggcgcaag
cccaaggatttcgatatttcaacctccgccacgccggaggaggtccgcgccgtattcggg
cgccgcatcgcccggattatcggcaagcgtttccggctggttcacgtcgaatacagcggg
gagctgttcgaggtcagcacgttccgccgggcgccgacgcgcacggcggcgaattcgaag
aaggagctgccggagaatctgattctttcggacaactccttcggcacggcggaggaggac
gcctggcggcgggacttcacggtcaacgcgctcttctacgatccggtcaattccgagctg
ctcgactatacggggcaggggatcgacgacatccgcaaccgggtcgtccgggcgatcggc
gacccgaagctgcggttcgaggaggaccccgtccgcatgctgcgggcgctgaagctgatc
ggccagtacgacttcacgatggatgcggcgaccgagaacgcgctcttttccgaacttgag
ctgatccgggtggcggcgccgtcgcgcctggcgctcgagcttgagaaaattctgtcgagc
gcctatggcgacaagcatttccaggcgttccacgactacgggctgctgccgtatttcctg
ccggaactgaacgcggcgtgggatacgccgcacggggattatgcgctgaatctcctgaac
gaacgcaattgccgggtcagggaggggctttaccgcaacagcgtctcgctcgccatggcg
gcgcttgcgctgccgttcgtcgagcttgagtgcggcggcaagccgggcgacctctggaat
ccgggaccggattcgacggccgcgatccgcggtgtgctcgatcggctgttcaagccgcag
acgatgatgaaccgcatgaccatgtcggccgaacgcgtgctgattctgcagtcgcttttc
cgggacgaaaaggcgaaaccgcgtctgatcgaggcgaagtcctatccgcatgcccgggag
ctgatgctgctccggctgtcggttgcggaggatgatacggccgaggccgagaagctgtgg
ccggcggcggttccgcgccgccgcatttccgcggcgaagcgcgaagatgccgaaagatcc
ccgcgccgtcgccgtcgccgcggcccgcggaaagagaaagagaaatcgcaggaggcatag
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