Nibricoccus aquaticus HZ-65: CMV30_02490
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Entry
CMV30_02490 CDS
T05426
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vbh
Nibricoccus aquaticus HZ-65
Pathway
vbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMV30_02490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbh03400
]
CMV30_02490
DNA repair and recombination proteins [BR:
vbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMV30_02490
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMV30_02490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
Kinesin
AAA_30
Mal_decarbox_Al
P-loop_SecA
TrwB_AAD_bind
Microtub_bd
SWI2_SNF2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ATC62918
UniProt:
A0A290QC63
LinkDB
All DBs
Position
complement(583861..585894)
Genome browser
AA seq
677 aa
AA seq
DB search
MLFKLNAEYQPTGDQPAAIEKLTASINAGHKHQTLLGVTGSGKTYTMANLIANCDRPTLI
ISHNKTLAAQLYSEFKNFFPENAVEYFVSYYDYYQPEAYVASSDTYIEKDSSINEEIERM
RISASSALVSRRDVIVVASVSCIYGLGSPEEFSSMKIPLRKGLPMERSRLLERLVENLYE
RNDYDLVRGRFRVRGDVVDIMPAYLEQGLRVEFFGDEIDALTEFDPLTGNTLRTLDQFDL
YPANQYVTSKDKLEGAIAGIKRELDERVAYFEAKGQYLEAQRIRMRTNYDLEMLQEMGFC
NGIENYSMHLSQRRPGERPFCLIDFFPKDFLLFIDESHATVPQVGAMYNGDKSRKQTLVD
FGFRLPSAMENRPQSFEEFLSVTGQTLYVSATPAKYELEKSAVIAEQLIRPTGLVDPEIT
IRPTKGQVEDLIAEVRRATEKGERVLVTTLTKRLSEDLTTFMREAKIRVEYLHSDIDAIE
RVEILRNLRLGNFDVLIGINLLREGLDLPEVALVAILDADKEGFLRSETSLVQTAGRAAR
HENGRVIFYADKITDSIRRTQEITAYRREKQIAYNKEHGITPRSVKRTAQASLHVYDGSG
REEEPMGVAEGGADEVKAVIAELEDEMAEAAGRLEFERAALLRDQITALKTGDFKKLSKS
TKKPGVKKGAGGARKWR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcaaacttaacgccgagtaccagccgaccggggatcagccagcggcgatcgag
aaattgaccgcgtcgatcaacgcggggcacaagcaccagacgttgctgggcgtcacgggc
tcgggaaagacgtacacgatggccaacctcatcgcgaattgcgaccggccgacgttgatc
atctcgcacaacaaaacgctggcggcgcagttatactcggagttcaaaaactttttcccg
gagaacgcggtcgagtatttcgtttcttactacgactattaccagccggaggcgtacgtg
gcgtcgagcgacacgtacatcgagaaggattcgtcgatcaacgaggagatcgagcggatg
cgcatttcggcgtcgagcgcgctggtgtcgcggcgcgatgtgatcgtggtggcgagcgtg
tcgtgcatttacggacttggttcccccgaggagttttcgtcgatgaagattccgctgcga
aaggggctgccgatggagcggtcgcggctgctggaacgcctcgttgagaatctctacgag
cggaacgattacgatctggtgcgggggcggttccgcgtgcggggcgatgtggtggatatc
atgccggcgtatctggagcagggactgcgcgtggagttttttggcgacgagatcgatgcg
ctgacggagttcgatccgctgacggggaacacgctgcggacactggaccagttcgatctc
tatccggcgaatcagtatgtgacttccaaggacaagctcgaaggggcgatcgcggggatc
aagcgggagctggacgagcgggtggcgtatttcgaggcgaagggacaatatctcgaggcg
cagcgcatccggatgcggacgaactatgacctggagatgcttcaggagatggggttctgc
aacggcatcgagaactactcgatgcatctctcgcagcgtcggccgggcgagcggccgttt
tgcctgatcgatttctttccgaaggattttctgctcttcatcgacgagagtcatgcgacg
gtgccgcaggtcggtgcgatgtataatggcgacaagtcgcggaagcagacgctggtcgac
tttggtttccggctgccgtcggcgatggagaaccggccgcagtcgtttgaggaatttctc
tctgtgacggggcagacgctttatgtgtcggcgacgccggcgaagtacgagttggagaag
tcggcggtgatcgcggagcagttgatccggccgacggggctggtcgatccggagatcacg
atccggccgacgaaggggcaggtcgaggatctgatcgcggaagtgcggcgggcgacggag
aagggtgaacgtgtgctggtgacgacgctgacgaagcggttgtcggaagatctgacgacg
ttcatgcgtgaggcgaagattcgcgtggagtatctgcactcggacatcgatgcgatcgag
cgcgtggagattttgcggaatctgcggctggggaatttcgatgtgttgatcgggatcaat
ctgctgcgcgaagggctcgatcttccggaggtggccctcgtcgcgattctcgatgcggac
aaggaaggttttttgcgcagtgagacgtcgctcgtgcagacggcggggcgcgcggcgcgg
cacgagaatgggcgggtgattttttatgcggacaagatcacggactcgatccggcggacg
caggagattaccgcgtaccggcgcgaaaagcagatcgcttataataaggagcatggaatc
acgccgcgcagcgtgaagcgcaccgcgcaggcgagtctgcatgtttatgatggcagcggg
cgtgaagaggagccgatgggagtcgcggaaggcggcgccgatgaagtgaaagcggtgatc
gcggagctcgaagacgagatggcggaagcggcgggacggttggagttcgagcgcgcggct
ttgctgcgcgaccagatcacggcgttgaagacgggggattttaagaagctctcgaaatcg
actaagaagccgggtgtaaaaaagggagctggcggggcgcggaagtggcgctaa
DBGET
integrated database retrieval system
