Nibricoccus aquaticus HZ-65: CMV30_05640 Help Entry CMV30_05640       CDS       T05426                                  Name (GenBank) RNA helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism vbh  Nibricoccus aquaticus HZ-65 Pathway vbh03018   RNA degradation Brite KEGG Orthology (KO) [BR:vbh00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CMV30_05640  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vbh03019]     CMV30_05640 Enzymes [BR:vbh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      CMV30_05640 Messenger RNA biogenesis [BR:vbh03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      CMV30_05640 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Utp25_C ERCC3_RAD25_C Flavi_DEAD P-loop_SecA Motif Other DBs NCBI-ProteinID:  ATC63478 UniProt:  A0A290QDR9 LinkDB All DBs Position complement(1336560..1337765) Genome browser AA seq 401 aa AA seqDB search MDTAFSKLGLDDTIAFAVQKMGYNDPTPIQAQAIPVVLAGGDVIGSAQTGTGKTAAFALP IIQRLGGHGKLRCLVLEPTRELALQVEEAFNKYILFTDLRTTVVYGGVGYGKQRDDLSRG IDILAATPGRLLDLMEQGDCSLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPKARQTLF FTATLPPEIASLAGWALTNPVEIKIGQRRSPAETISHAFYPVVASQKFDLLEELMKRTEY KSVIVFSRTKFGADRIARRLQQAGHSVGVIHADRNQRERTEALAGFKAGTFEVLVATDIA ARGLDIAGVSHVINYDVPENPEDYVHRIGRTGRAQTTGDAFTLVTEEDVRDARSIERFIN ATIERKKLDGFSYIYSALFDETAQPAAAPKPASRLHRGARR NT seq 1206 nt NT seq  +upstreamnt  +downstreamnt atggacacggctttctcgaagctcggtctcgacgacacgatcgcgttcgcggtgcagaag atgggttacaacgatccgacgccgatccaggcgcaggccattcccgtggtgctggcgggt ggcgatgtgatcggctcggcgcaaacgggcacgggaaagacggcggcgtttgcgctgccg atcatccagcggctcggtggtcacggtaagctgcgctgtctcgtgctggagccgacgcgc gaactcgcgctgcaagtcgaggaagctttcaacaagtatatcctcttcaccgatcttcgc acgactgtcgtgtatggtggcgtcggttacgggaagcagcgcgacgatctttcgcggggc atcgacatcctggcggcgacgccggggcgtctgctcgatctgatggagcagggcgattgc tcgctcgccgatgtcgagatcctcgtcctggacgaagtggaccgcatgctggacatgggt ttccttcccgacgtgaagcgcatcgtgcagcaatgcccgaaggcgagacagacgttattc ttcacggccacgctgccgccagagatcgcgtcgctggcgggctgggcgctgacgaatccg gtagagatcaagatcggccagcggcgttcgccggcggagacgatctcgcatgcgttctac ccggtggtggcgtcgcagaagttcgatctgctggaagagctgatgaagcgcacggagtac aagagcgtgatcgtcttcagccgcacgaaatttggcgcggaccgcatcgcgcgccgcctt cagcaggcggggcatagcgtcggcgtcatccatgccgaccgtaatcaacgtgagcgcacg gaggcgctggctggattcaaggcaggcaccttcgaggtgctggtcgcgacggacatcgct gcacgcggcctggatattgcgggcgtgtcccacgtgatcaactacgacgtgccggagaac ccggaagactacgtgcatcgtatcggccgcacgggtcgcgcgcagacgacgggcgatgcg ttcacgctggttacagaggaggatgtgcgcgatgcgcgctcgatcgagcgcttcatcaac gcgacgatcgagcgcaagaagctcgatggtttcagctacatctactcggcgcttttcgac gaaactgcgcagcccgcggccgctccaaaacccgcgagccgacttcatcgcggcgcgcgt cgctga

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