Nibricoccus aquaticus HZ-65: CMV30_06560
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Entry
CMV30_06560 CDS
T05426
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vbh
Nibricoccus aquaticus HZ-65
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CMV30_06560
Enzymes [BR:
vbh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CMV30_06560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ATC63638
UniProt:
A0A290QE78
LinkDB
All DBs
Position
complement(1567944..1569983)
Genome browser
AA seq
679 aa
AA seq
DB search
MKRTQRWLSLVLAVCAGFATSVSAQRQMEKLDRGVVAVHQPDGKVFVSWRLLATDPDGVT
FNVYRTTTMRESERADGGGTFASRPDAGGGTVKVNADPVKGGTWVLDARATLARATEYSV
KPVIDGKEGEALGSYKLAAGAAPLPYHSVPLQTPAGYVPGDSSLGDLDGDGQYEIVVHQC
GMGKDNSQPGMTDAPIFQAYKLDGTLLWTINLGKNIREGAHYTQFLVYDFDGDGRAEFVC
KTADGTVDGKGKVIGDANAVWVSQEDPNQPAPAPGQRRPEGSSRAGFILKGPEFLTVFDG
LTGAALATEKYVPGRHPETENPTADQMKEVWGDGHGNRLDRYLAGVAYLDGERPSIVMCR
GYYTRTVLAAWDWRGGKLTQRWVFDSDSSDENKKYRGQGNHNLSVADVDGDGRDEIVYGA
AVIDDDGKGLYSTGWGHGDALHVSDHVPENPGLEVFDIQERFDKQGMSMRDAKTGRPIFT
VPSVKAADDGGDKGEGPGRGVAANIDPRFPGSESWAAGAGMDGVYNAKGEKILEKRPRGF
SCNFLVWWDGDLLRELLDQNAVSKWNWETGQVDTLLVAHACQSNNGTKSNPAVSADLWGD
WREEVIWRTRDNKELRIYTSTIPTKHRIVSLMQDPQYRLSIAWQNVAYNQPPHTGFYLDE
SAPLPKKPVIKIVGSSAVK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacccaacgttggttgtctctcgtgctggctgtctgtgctggtttcgcgacg
tctgtgtctgcgcagcggcagatggaaaaactcgatcgcggcgtggtcgccgtgcaccag
ccggatggaaaagtgtttgtgagctggcgtctgctggcgacggatccggacggcgtgacc
tttaatgtttatcgcacgacgacgatgcgcgagagcgagcgggcggatgggggcgggacg
tttgcgtcacggccggatgcgggtggtggcacggtgaaggtaaatgctgatccggtgaag
ggaggcacgtgggtgctggatgcacgggccacgctggcacgcgcgacggagtactcggtg
aagccggtgatcgacgggaaagaaggcgaggcgttgggaagttataaactcgccgctggc
gcggcgcctctgccgtatcactcggtacccttgcaaacgccggcgggctatgtgccgggc
gacagttcgctgggcgatctcgatggagacgggcaatatgagatcgtcgttcaccagtgt
ggcatgggtaaggataattcgcagccgggcatgacggatgcacctattttccaggcgtac
aaactcgacggcacgctgctgtggacgatcaaccttgggaaaaacatccgcgagggcgcg
cactatacgcagttcctcgtgtacgacttcgatggagacgggcgtgcggagtttgtctgc
aagacggcggacggcacggttgacgggaagggcaaggtcatcggtgatgcgaatgcggtc
tgggtatcgcaggaagatccgaaccagccggcaccggctccggggcaacgacgtccggaa
gggagcagccgtgcggggtttattttgaaagggccggagtttctcacggtgttcgacggg
cttacgggcgcggcgctggcgacggagaagtatgtgccagggcggcatccggagacggag
aatccgacggcggaccagatgaaggaagtctggggtgacggtcacggaaaccggctggat
cgttatctggcgggtgttgcgtatctcgacggcgagcggccgagcatcgtaatgtgccgc
ggttattatacgcgtactgtgctggcggcatgggactggcgcggcgggaagctgacgcag
cgctgggtgttcgacagcgattcatcggacgagaacaaaaagtaccgcgggcagggaaat
cataacctgagcgtggcggatgtggacggcgacggacgcgatgagatcgtgtacggcgcg
gcggtgatcgatgacgatggcaagggcctttactcgacgggctggggtcacggtgacgcg
ctgcatgtgagcgatcatgtgccggagaatcctgggctggaggtattcgatattcaggag
cgcttcgacaagcagggcatgagcatgcgcgatgcgaagacggggcggccgattttcacg
gtgccttcggtgaaggcggcggatgatggcggcgacaaaggcgaaggcccggggcgtgga
gtggcggcgaacatcgatccgcgtttccctggctcggagtcgtgggcggcgggtgctggc
atggacggtgtgtataacgcgaagggagaaaaaatcctggagaagcggccgcgcgggttc
tcgtgcaatttcctcgtgtggtgggatggcgatttgctgcgcgagctgctcgatcagaat
gcggtctcgaagtggaattgggagacggggcaggtggacacgttgctcgtggctcatgcg
tgccagtcgaacaacgggacgaaatcgaatccggcggtgagcgcggatctgtggggcgac
tggcgcgaggaagtgatctggcgcacgcgcgataataaggagctgcgcatctacacgagt
acgattccgacgaagcaccggatcgtgtcgctcatgcaagatccgcagtaccggttgtcg
atcgcgtggcagaatgtggcgtacaaccagcctccgcatacgggtttctatctggatgag
tcggcgccgttgccgaagaagccggtgatcaaaatcgtgggttcgagcgcagtgaagtga
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