Nibricoccus aquaticus HZ-65: CMV30_08195
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Entry
CMV30_08195 CDS
T05426
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vbh
Nibricoccus aquaticus HZ-65
Pathway
vbh00040
Pentose and glucuronate interconversions
vbh01100
Metabolic pathways
vbh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CMV30_08195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMV30_08195
Enzymes [BR:
vbh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CMV30_08195
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ATC63934
UniProt:
A0A290Q622
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All DBs
Position
2018461..2019648
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AA seq
395 aa
AA seq
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MRATPPLQPATREAQTSSRQPRHPTFALPLTAHPGVVLSLLSHPAWFLTPQPPAKAAARA
KRSPGPPPTPDPMLNRFARALRPRAPTPNVMHLLQTPLARILALALLCLAPHVASHAADG
YGRNTTGGGSGTTVTVTTAAQLKTYAESTTAYNIIVSGTIDAAATGSSVKVKSNKTIKGA
NTSATIKGCLDLGSGGVNNVIIQNLNITNPSGDGVTCWGATNVFCTKVNFYDCGDGSFDI
SQGASKVTVSWCKFSYPTQSAHRFAMILGNVDVSQNYETTLHHNWFAARCDQRMPSGSYS
MAHVYNNYFNATGNSYCTNARAGSNWIAENNYYQSVKSPLYEEGGGKIKSSGNTFASCTG
LINVATGTGFTLPYGYTLDPTANVPTRVQNGAGNR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcaacgcccccgttgcagcccgccacgcgcgaagcacaaacctcctcccgtcag
ccgcgccaccccactttcgcgctcccgctgaccgcccaccccggcgtcgttctttcgctg
ctttctcaccccgcttggtttctcaccccgcaaccgcccgccaaggctgctgcgcgcgcg
aagcgttcccccggcccgcccccaacccctgatccgatgctcaaccgcttcgcacgggca
ctccgtccgcgcgcacccaccccaaacgttatgcacctcctccaaactccgctcgcccgc
atcctcgcactcgccctcctctgcctcgcccctcacgtcgcctcccacgccgccgacggc
tacggccgcaacaccaccggcggcggctccggcaccaccgtcacggtcaccaccgccgcc
cagctcaaaacctacgccgaatccaccaccgcctataacatcatcgtctccggcaccatc
gacgccgccgccaccggctcctccgtgaaggtcaaatccaacaaaaccatcaagggcgcc
aacacctccgccaccatcaagggatgcctcgatctcggcagcggcggcgtgaacaacgtc
atcatccagaatctcaacattaccaacccctccggcgatggcgtcacctgctggggcgcg
accaacgtcttctgcaccaaggttaacttctacgactgcggcgacggctccttcgacatc
tctcaaggcgccagcaaggtcaccgtctcctggtgcaaattctcctaccccacccagagc
gcgcatcgtttcgccatgattctcggcaacgtcgacgtctctcaaaattacgagaccaca
ctgcatcacaactggttcgccgcccgctgcgatcagcgcatgccctccggcagctacagc
atggcgcacgtctacaacaactacttcaacgccactggtaacagctactgcaccaacgcc
cgcgccggctccaactggatcgccgaaaacaactactaccagagcgtgaagagcccgctc
tacgaagagggcggcggcaaaatcaaatcctccggcaacaccttcgccagctgcaccggc
ctcatcaacgtcgccaccggcaccggcttcaccctgccctacggctacacgctcgacccc
accgccaacgttccgacgcgcgtccaaaacggcgccggcaaccgctga
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