Nibricoccus aquaticus HZ-65: CMV30_10545
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Entry
CMV30_10545 CDS
T05426
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vbh
Nibricoccus aquaticus HZ-65
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vbh03032
]
CMV30_10545
03400 DNA repair and recombination proteins [BR:
vbh03400
]
CMV30_10545
Enzymes [BR:
vbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CMV30_10545
DNA replication proteins [BR:
vbh03032
]
Prokaryotic type
DNA Topoisomerases
CMV30_10545
DNA repair and recombination proteins [BR:
vbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMV30_10545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ATC64357
UniProt:
A0A290Q7Y0
LinkDB
All DBs
Position
2604350..2605411
Genome browser
AA seq
353 aa
AA seq
DB search
MASIALMDSAGAAKEAGLRYVTDDSRGITRRRAGKAFRYLMPDGAPVKNADTLARIRSLA
IPPAWSDVWICPLTTGHLQATGRDVRNRKQHRYHPEWRAIRDQTKYERMIAFGRVLPALR
RKVERDLRRLGTGREKVLAAVTRLLEATLIRVGNEEYVRQNGSFGLSTLRDRHVSIRGGT
MHFAFLGKSGKRHAIDLHDPRLAKIVRSAQELPGQTLFQYEDEAGNVQKIASEDVNAYLR
EIGGEEFSAKDFRTWAATVLAAEALRGFECVHSKVQAKKNVISAIKHVAERLGNTPAICR
KSYIHPVILNSYLDGLTVTVMKTRAEKISRGSLTPIEAAVLEFLQKQLTAAQS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatcgcgctcatggacagcgctggtgcggccaaagaagccggattgcgctat
gtcaccgatgattccagagggatcactcggcggcgtgcaggaaaggcctttcgctacctg
atgccggatggcgctccggttaagaacgccgacactcttgcgcgcatccgcagtctggcg
attcctcctgcttggtcagatgtctggatttgtccgcttacgacggggcatttgcaggcg
acgggacgggatgtccgtaaccggaagcagcaccgttatcatcccgagtggagagcaatt
cgcgatcagacgaagtacgagcgcatgattgcttttggccgggtgctgccggctctaagg
cgcaaggtggagcgcgatctgcggcggcttggaactggccgtgagaaagtgctggcagcc
gtcacgagacttcttgaagcgacgttgatccgcgtgggcaacgaagagtatgtgcggcaa
aacggatctttcgggttgagcacactacgggaccggcatgtctcgattcgcggtgggacg
atgcacttcgcgtttcttgggaaaagcgggaaacggcatgcgatcgatcttcatgatccg
cgtctggcgaagatcgttcgcagtgcgcaggaactgccgggacagacactttttcaatat
gaggacgaggcaggcaacgtgcagaaaatcgcctctgaagatgtgaacgcttatctgcgg
gaaatcggaggcgaggagttttcggcgaaggattttcgcacgtgggcggcgacggttctg
gcggcggaggcgctacgcgggttcgaatgcgtgcactcaaaagtgcaggcaaagaaaaat
gtgattagcgcgatcaaacatgtagccgagaggttggggaatacgccggcgatctgccgg
aagtcgtacatccatcccgtgattttgaacagttacctggatggactcacggtaacggtc
atgaaaacacgggccgaaaaaatctctcgcggcagtctgacaccgatcgaggcggcggtg
cttgaatttcttcagaagcaattaaccgccgcgcagagctga
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