Nibricoccus aquaticus HZ-65: CMV30_12550
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Entry
CMV30_12550 CDS
T05426
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vbh
Nibricoccus aquaticus HZ-65
Pathway
vbh00521
Streptomycin biosynthesis
vbh00523
Polyketide sugar unit biosynthesis
vbh00525
Acarbose and validamycin biosynthesis
vbh00541
Biosynthesis of various nucleotide sugars
vbh01055
Biosynthesis of vancomycin group antibiotics
vbh01100
Metabolic pathways
vbh01110
Biosynthesis of secondary metabolites
vbh01250
Biosynthesis of nucleotide sugars
Module
vbh_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CMV30_12550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CMV30_12550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CMV30_12550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CMV30_12550 (rfbB)
00525 Acarbose and validamycin biosynthesis
CMV30_12550 (rfbB)
Enzymes [BR:
vbh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CMV30_12550 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATC64722
UniProt:
A0A290QL82
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All DBs
Position
complement(3139306..3140373)
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AA seq
355 aa
AA seq
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MNILVTGGCGFIGSNFIRQRLTETGSPLTKLVNLDALTYAGNPANLADLASDPRYVFAHG
DIGDTALVSKLLADHAIDAVVNFAAESHVDRSIDSPEPFIQTNVVGTLRLLNAARLHWAK
LPTSKKEAFRFLHVSTDEVYGTLAAGDAPWNEECPYEPNSPYAASKASSDHLVRSFQHTY
GFPTVTTNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGDGQQIRDWLYVEDHATAIWL
ALTKGRVGETYNVGGLNERPNLEIVNRICAILDKRSPRADGKPYITQITYVADRPGHDRR
YAIDSTKIRKELGWSPKENFDTGIEKTVDWYLKNRTWAADITSKKYARERLGTKA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctcgtcaccggcggctgcggcttcatcggctccaacttcatccgccagcgc
ctcaccgaaaccggctcgcctctcacgaaactcgtcaacctcgacgccctcacctacgcc
ggcaaccccgccaatctcgccgacctcgcttccgatccacgctacgttttcgcgcatggc
gacatcggcgacactgccctcgtttcaaaactcctcgccgatcacgccatcgacgccgtc
gttaacttcgccgccgaatctcacgtcgaccgctccatcgattcccccgagcccttcatc
caaaccaacgtcgtcggcaccctccgcctcctcaacgccgcccgtctccactgggcaaaa
ctcccgacgtcgaaaaaagaagcgttccgcttcctccacgtctccaccgacgaagtctac
ggcaccctcgccgccggcgatgctccttggaacgaggaatgcccttacgaacccaactca
ccctacgccgcctcgaaggcctccagcgaccacctcgtccgctcctttcaacacacctac
ggcttccccaccgttacgaccaactgctccaacaactacggccccttccactttcccgag
aaactcatcccgctgatgattctcaacgccctcgagggaaaaccgctccccgtttacggc
gacggccagcaaatccgcgactggctctacgtcgaagaccatgccaccgccatctggctc
gccctcaccaaaggccgcgtcggcgaaacctacaatgtcggcggcctcaacgaacgcccg
aatcttgaaatcgttaaccgcatctgcgcgatcctcgacaaacgatcgccccgcgccgac
ggcaaaccctacatcacgcagatcacctacgtcgccgaccgccccggtcacgaccgccgc
tacgcgatcgacagcaccaaaatccgcaaagaactcggctggtcccccaaggaaaacttc
gacaccggcatcgagaaaaccgtcgactggtatctcaaaaaccgcacctgggccgccgac
atcacttcgaaaaaatacgcccgcgaacgcctcggcaccaaagcctga
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