Kiritimatiella glycovorans: L21SP4_01038
Help
Entry
L21SP4_01038 CDS
T04225
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
vbl
Kiritimatiella glycovorans
Pathway
vbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L21SP4_01038 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbl03019
]
L21SP4_01038 (rnr)
03016 Transfer RNA biogenesis [BR:
vbl03016
]
L21SP4_01038 (rnr)
Enzymes [BR:
vbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
L21SP4_01038 (rnr)
Messenger RNA biogenesis [BR:
vbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L21SP4_01038 (rnr)
Transfer RNA biogenesis [BR:
vbl03016
]
Prokaryotic type
tRNA degradation factors
L21SP4_01038 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
Motif
Other DBs
NCBI-ProteinID:
AKJ64296
UniProt:
A0A0G3ECR8
LinkDB
All DBs
Position
1234456..1236711
Genome browser
AA seq
751 aa
AA seq
DB search
MSEFRPSFEQQIYKFMNDPAYRPMRTSELARELGIDTSRRRAFRTALKSLETEEKIVRIR
HNRWAVARAQKTVRGRLSVSPDGNGMIRVEGETRDRALYVAAENLQCGLHRDLVEAEVLP
SGAGRRSGEGRVVRVLERWFTQVVGLVRHTPYYAYVVPDNPRLHQTVQLDTDPRGEPPPE
DHKVVVELDEWTDPLRPLTGRCLEDIGHRDAPGVAMQCIIRSHGYRQEFPAEVEEEQQRL
MASPPPVEHEHRRDRTEEVAFTIDPDTARDFDDAISIREHPEGGWLLGVHIADVSHYVRP
GSAMDVEAAKRGNSVYLVDRVIMMLPEKVTAELCSLKPDRVRAAHTMECRITDEGEILSS
DTFPASIRSRARLTYRQVQAYFDEGTAAGIPAEVQKGLSRLHTLTMRWRRDRLRHGSIDL
ALPEVECRLDTEGRIKGVETREGSEAQHLVEECMLLANRVVARRLHEAPCPALYRVHGDP
EPDQWSQMAAELESLGITDPPSNQSEINAMLRRLPDGWLRYAAMLCVLRNFQRAYYTTEP
GGHFGLGFECYSHFTSPIRRYPDLLIHRLLSALEQNAPPPCTAEQLANLADHCSQTEREA
EEAEKESVEQKRVEYYADQLRKGHTGPYRAHIVRFLKKGLIVELEESLQRGLVAFSGITD
DFYRLNEERTRAVGRRGKKRMHIGEAIDVLLVKVDTARRWLDFQFADERRTGSRGGKGRQ
GSRGGTRGRPAGKKGSRGNKKGRPSKSRKKR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtttcgtccctccttcgagcagcaaatctataaattcatgaacgatcccgcc
taccgcccgatgcgcacctcggagctggcgcgggaactcgggatcgacacctcccgccgc
cgcgcgttccgcacggcgctcaagtcgctggagacggaggaaaaaatcgttcgtatccgc
cataaccgctgggctgtggcgcgagcacagaaaacggtacgcggccggctctcggtcagc
ccggacggcaacgggatgatccgggtcgagggagaaacgagggaccgcgcgctgtacgtc
gcggcggagaatctccagtgcggtcttcaccgcgacctcgtcgaagcggaagtgctgccc
tcgggagcaggccggcgcagcggcgagggtcgcgtggtgcgggtcctggagcgctggttc
acgcaggtcgtcggtctcgtgcgtcataccccttattacgcgtatgtcgttccggacaat
ccgcggctgcatcagaccgtgcagctcgacacggacccgcgcggcgagcctccccccgag
gatcacaaggtggtggtcgaactcgacgagtggaccgatcccctgcggccgctcaccggg
cgctgccttgaagacatcggccaccgcgacgcgccgggggtggccatgcagtgcatcatc
agaagccacgggtaccggcaggagtttcccgcggaggttgaagaggagcagcagcggctg
atggcctcgcctcccccggtcgaacacgagcatcgtcgtgaccgcacggaagaagtcgcg
tttacgatcgatccggacacggcgcgcgatttcgacgacgcgatatcgatccgcgagcac
cccgagggcggctggctgctgggcgtacatatcgccgacgtatcccactacgtgcgtccg
gggtcggcgatggacgtcgaggcggccaaacggggcaacagcgtatacctggtcgaccgc
gtgatcatgatgcttcccgaaaaggttacggccgaactctgcagtctcaagcccgaccgg
gtgcgcgccgcgcataccatggagtgccgtataaccgacgaaggggagatcctgtcttcc
gacacgtttcccgcgtcgatccgttcgcgcgcgagactgacgtaccggcaggtccaggcc
tatttcgatgaaggcaccgccgcgggcattccggctgaagtgcagaagggactctcgcgg
cttcacacgctcaccatgcgctggcgccgggaccgcctcaggcacggatcgatcgacctc
gccctgccggaggtggaatgcaggctggatacggaaggacggatcaagggggtcgagacc
cgggagggcagcgaagctcagcacctggtggaggaatgcatgctgctcgccaaccgcgtg
gtggcccgccggctgcacgaggccccctgccctgcgctctaccgtgtgcacggcgacccg
gaaccggaccagtggagtcagatggccgccgaactggaatcgctgggcatcaccgacccc
ccttccaaccagtccgaaatcaacgcgatgctgcgccggcttcccgacggatggctgcgt
tatgcggccatgctgtgcgtgctgcggaacttccagcgggcgtattacaccacggaaccg
ggcggtcatttcgggctcgggttcgagtgctactcccacttcacttctccgatccggcgc
tatccggacctcctgatccaccggctcctctccgcgctcgagcagaatgcgccgccgccc
tgcacggcggaacaactcgccaacctcgccgaccactgcagccagacggaacgggaggcc
gaagaggccgagaaagagagcgtagagcagaaacgggtcgagtattacgccgatcagttg
cggaaaggccatacgggaccctatcgcgctcatatcgtacgattcctgaagaagggcctg
atcgtcgaactggaagaatcgctccagcgcggtctggtcgccttttccgggatcaccgac
gacttctatcgcctgaacgaggagcgcacccgggcggtgggccggcgcggcaaaaagcgc
atgcacatcggagaggcgatcgacgtcctgctggtcaaggtggacacggcacggcgctgg
ctggattttcagtttgccgatgaacgccgcaccggatcgcgcggcggcaaggggcgccaa
ggaagcaggggcggcaccaggggccgcccggccggaaaaaagggttcacgcggaaataaa
aaaggccggccctcaaagagccggaaaaaaaggtga
DBGET
integrated database retrieval system
