Kiritimatiella glycovorans: L21SP4_01382
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Entry
L21SP4_01382 CDS
T04225
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
vbl
Kiritimatiella glycovorans
Pathway
vbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L21SP4_01382 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vbl03019
]
L21SP4_01382 (rhlB)
Enzymes [BR:
vbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L21SP4_01382 (rhlB)
Messenger RNA biogenesis [BR:
vbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L21SP4_01382 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AKJ64630
UniProt:
A0A0G3EII9
LinkDB
All DBs
Position
complement(1628061..1629638)
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AA seq
525 aa
AA seq
DB search
MGIRDWFTRKKTTGTDEGGASKTRQRRGRIREEGKQSGKTQRKGETWRPAGGEKEKPRRE
RPPEKNAATGDAKERPGGGKAAEKKWKPESFQVEPQEGRTRFHDFDLPGEVMRAIAELGF
EYCTKIQAEILPHTLQGRDAAGQAQTGTGKTAAFLIQIFTVLLRRPVQGERKKGAPRALM
VAPTRELVLQIEKDAHDLGKYTGFKTVCVYGGMDFNKQMRDLDGTVDLVVATPGRLLDFN
RRRVIDLRQVEVLVLDEADRMLDMGFIPDVRKIVRATPFKDKRQTLLFSATLDESVMRLA
HSWMTEPVRVEIEPERLAAEAIDQKVYITTEEQKFKLLHNILEKVVHGQALIFVNRRDQV
DRLTDLLNRHGIPCEALSGAVNQKKRMRIIEHYKSGKIRCVVATDVAGRGLHVEDISHVI
NYNTPQNPEDYVHRIGRTGRAGSEGTSVTFASETEAFEIPAIEELLGDRLSCEHPPDELL
QELPKPTRPAAKPRGKRDGGGSGSRRSGRSGRPRGRRSGGGRRRS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgggtattcgcgactggttcacgaggaaaaagaccaccggaacagatgagggcggagcg
tcgaagacgcgccaacggcgcggccggatccgcgaagagggtaaacaaagcggaaagacg
cagcggaaaggcgagacatggcgtccggcagggggcgaaaaagaaaaaccgcgccgtgaa
cgcccgccggaaaaaaacgctgcgaccggggatgcgaaggagcgtcccgggggcggaaag
gcggcggaaaagaagtggaagcccgagtcgtttcaggtcgagccgcaggagggccggacc
cgttttcacgatttcgatctgccgggcgaggtgatgcgcgccatcgcggaactcgggttc
gagtactgcacgaagattcaggccgagattcttccccacacgctccagggccgggacgcc
gccggccaggcccagaccggcaccgggaagacggccgcctttctgattcagatcttcacc
gtcctcctccgccggccggtgcagggcgaacgcaaaaaaggcgccccccgtgcgctgatg
gttgcccccacccgggaactggtgctgcagatcgagaaagacgcccacgatctcggtaaa
tacacggggttcaaaacggtctgcgtctacggggggatggatttcaacaagcagatgcgt
gatctcgacggcaccgtggacctggtggtcgcgactccgggacggctgttggatttcaac
cggcggcgcgtgatcgatctgcgccaggtggaggtgctggtgctcgacgaggccgaccgt
atgctcgacatgggattcatccccgacgtacggaagatcgtgcgcgccaccccgttcaag
gacaaacggcagacgctgctgttcagcgcgacgctggacgagagtgtgatgcggctggcc
cattcctggatgaccgagcccgtgcgcgtggagatcgaacccgagcggctggcggcggag
gccatcgaccagaaggtctacatcaccaccgaagaacagaagttcaagctgctccacaac
atcctcgagaaggtggtgcacggacaggcccttatattcgtcaaccgccgggaccaggtg
gaccgcctcacggacctgctgaaccggcacggcattccctgcgaggccctctccggcgcg
gtcaatcagaagaagcgcatgcgtatcatcgaacactacaagtcagggaagatacgctgc
gtcgtcgcgaccgatgtcgccggacgcgggctgcacgtggaagacatcagccacgtgatc
aactacaacacgccgcagaacccggaggactacgtgcaccgcatcggccgtacgggccgc
gcgggttccgagggtacttcggtgacgttcgcatccgagacggaggcgttcgagattccg
gccatcgaggaactccttggcgaccggcttagctgcgaacatccgccggatgaactgctg
caggaacttccgaagccgacccgaccggcggcaaagccacggggcaagagggacggcggc
ggcagcggttcgcggcgctcgggccgctcggggcgcccgcggggccggcgatcgggaggc
ggaaggcggcggtcatga
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