Kiritimatiella glycovorans: L21SP4_01455
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Entry
L21SP4_01455 CDS
T04225
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vbl
Kiritimatiella glycovorans
Pathway
vbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L21SP4_01455 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vbl03021
]
L21SP4_01455 (rho)
03019 Messenger RNA biogenesis [BR:
vbl03019
]
L21SP4_01455 (rho)
Transcription machinery [BR:
vbl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L21SP4_01455 (rho)
Messenger RNA biogenesis [BR:
vbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L21SP4_01455 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA
Spore_III_AA
AAA_25
AAA_14
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKJ64701
UniProt:
A0A0G3EE17
LinkDB
All DBs
Position
complement(1721262..1722698)
Genome browser
AA seq
478 aa
AA seq
DB search
MSDEQNQQNERNQQNEQQKQQQKNRRGNDGGNKGGGGQRGKRGRGGGRNQNKEKDRRNTG
PFLDLKDLQAMKVPQLHEQAQKFELEDFAGLRRHELVFEILKAHARNNGRLRGEGVLEVL
PDNFGFLRSPRYNYLPCPEDIYISPSQIRRFGLRTGDHAAGEIRPPKDRERFFAMLQMES
INGMEPEQNRHRIPFEQQTPLFPEDRFHLERDSKEISMRVMDILTPIGKGQRGLIVAPPR
TGKTVLLQKIANSISTNNPEAELIILLIDERPEEVTDTERNTRAQVLSSTFDEPPERHTQ
VAEIVSEMAKRRAELGKDVVILLDSITRLARAYNTLQPHSGKILSGGVDANALQKPKRFF
GAARNLEDSGSLTIIATALVDTGSRMDEVIFEEFKGTGNMELGLDRSLVDKRIFPAINVE
KSGTRKEELLLHPDELERIWTLRRALKDVPAVEAMELLINRLKKTSSNAEFLMALQNK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacagaatcagcagaacgagcggaatcagcagaacgagcagcaaaagcag
cagcagaaaaatcgtcgcggcaatgacggcgggaacaagggcggcggcggtcagcgcggc
aagcgcgggcgcgggggcggccgcaatcagaacaaggagaaggaccgccgcaacaccgga
ccttttctggatctgaaagatctgcaggcgatgaaggtgccccagctgcacgagcaggcg
cagaagttcgagctggaggacttcgcgggtctccgccgccacgaactggtcttcgagatc
ctcaaggcccacgcgcgcaataacggaagactgcgtggcgaaggtgtgctcgaggtcctt
cccgataacttcggatttctccgctccccccggtacaactaccttccctgtccggaagac
atatacatctccccctcgcagattcgccggttcgggctgcgtaccggcgatcacgccgcc
ggcgagatccgcccccccaaggaccgggaacggttctttgcgatgctccagatggaatcc
atcaacgggatggagcccgagcagaatcgtcaccgcatcccgttcgaacagcagaccccg
ctgttcccggaagaccgttttcatctcgaacgcgacagcaaagagatctcgatgcgggtc
atggacatcctgaccccgatcgggaaggggcagcgaggactgatcgtcgcgccgccgcgc
accgggaaaacggtgctcctgcagaagatcgccaacagcatcagtaccaacaatcccgag
gcggaactgatcattctgctcatcgacgagcgtccggaagaggtgaccgacaccgagcgc
aataccagggcgcaggtcctctcgtccacgttcgacgaaccgccggaacgccatacgcag
gtggcggaaatcgtcagcgagatggccaagcgccgcgcggaactcggcaaggacgtggtc
atcctgctcgacagcatcacccggctggcccgcgcgtacaacacgctgcagccgcacagc
ggcaagatcctctcgggcggggtcgacgccaacgcgctgcagaaacccaagcggtttttc
ggcgcggcccggaacctggaggacagcggcagcctgaccatcatcgccaccgcgctggtg
gatacgggcagccgcatggacgaggtgatcttcgaggagttcaagggcaccggcaacatg
gagctgggtctcgaccgcagcctggtcgacaaacgcatcttccccgcgatcaatgtcgag
aaatccggcacgcgcaaggaagagctgctcctgcacccggacgagctggaacgcatctgg
accctccgccgcgcgctcaaggatgtccccgcggtggaagcgatggaactgctcatcaac
cggctcaagaagacctccagcaacgccgagtttctcatggcgctgcagaataaatag
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