KEGG   Variovorax boronicumulans: CKY39_01230
Entry
CKY39_01230       CDS       T05068                                 
Symbol
vasA
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
vbo  Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_01230 (vasA)
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_01230 (vasA)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: ATA51998
UniProt: A0A250DC95
LinkDB
Position
263734..265605
AA seq 623 aa
MDAKLLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARI
QLKMDAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTLLRGRM
IKGEQTACEFRTGHAVTLWPIKIAEASLGPVPAEIAHALPMAARQAKSAITIKLEAVGGA
RFAEMPLDRLEFFLSGAELHALRVLELVAHHSVATVCRAGPGSTARIVPLGDEAIRHEGF
DPEQALLPYDARSFQGYRLLHEYFAFPERYLFFSVKHLRAAASAIGGTTMEIVILLDRAD
ADLERLVDARHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVERVT
GHMANGSEEREFRPFLGSFASDDGDFGAYFSLRREPRLVSDRARAQGTRTSYTGSEVYVS
LVDQHDAPFPHSLRHITIDALCTNRDLPLLLPTGLESDFTLRVSAPVRGVRILRGPSRPY
PALAEGALTWRLISHLGLNYLSLTDVDATQGAAALREMLDLYGNLADPAVRRQIQGVRSM
ALAPVFRRLPEPGPIVFGRGVEIALQIDEVAFSGASPYLFGAVLEQFFSRHVSLNAFTEF
ALSSLQRGEIARWTPRVGRRPTV
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggacgccaagctcctcgactactacaaccgcgaactcacctacatgcacgagctcggg
gccgagttcgcgcagcgctaccccaagatcgcgggccggctgggcatgcgcggcatcgag
gtcagcgacccgtatgtggagcgcctgctcgaaggcttcagctttctcacggcgcgcatc
caactcaagatggacgcggagtttccgcgcttctcgcagcgcctgctcgaggtggtgtac
cccaacttccttgcaccgctgccggcgatggccgtggtgcagatcgacggcaacctcaat
gaaggctcgctgaaggcgggctacgagctgccgcgccacacgcttctgcgcggacgcatg
atcaagggcgagcagacggcctgcgagttccgcacgggccatgccgtcacgctgtggccg
atcaagatcgcggaggccagcctcggtccggtgccggccgagatcgcgcacgcgctgccg
atggcggcgcgccaggcgaagagcgcgatcaccatcaagctcgaggcggtgggcggcgcg
cgctttgccgagatgccgctggatcggctcgagttctttctctcgggcgcggagctgcac
gcgctgcgcgtgctcgaactggtggctcaccacagcgtggccaccgtgtgccgtgccggc
cccggcagcacggcgcgcatcgtgccgctgggcgacgaggcgatccgccacgagggcttc
gaccccgagcaggcgctgctgccctacgacgcgcgctcgttccagggctaccgcctgctg
cacgagtacttcgcctttcccgagcgctacctgttcttcagcgtgaagcacctgcgcgcg
gcggcctcggccatcggcggcaccacgatggagatcgtgatcctgctcgaccgcgccgac
gccgacctggagcggctggtcgatgccaggcacttctcgctgttctgcacgcccatcatc
aacctcgtgccgcgccgcagcgaccgcatcccggtcgggccgggccagcacgagcaccat
gcggtgatcgaccgcacgcgcccgcgcgacttcgagatcttcaccgtcgagcgcgtcacg
ggccacatggccaacggctccgaagagcgcgagttccggcccttcctcggctcgttcgcg
tccgacgacggcgacttcggcgcctacttctcgctgcgccgcgagccgcgcctggtgtcc
gaccgcgcgcgcgcgcagggcacgcgcaccagctacaccggcagcgaggtgtacgtgtcg
ctggtcgaccagcacgacgcaccgttcccgcacagcctgcgccacatcaccatcgacgcg
ctgtgcaccaaccgcgacctaccgctgctgctgcccaccgggctcgaatcggacttcacg
ctgcgcgtgtcggcgccagtgcgcggcgtgcgcatcctgcgcggcccgtcgcggccgtac
ccggcgctggccgaaggcgcgctcacctggcgcctcatcagccacctgggcctgaactac
ctgagcctgaccgacgtcgatgccacgcagggcgccgcggccttgcgcgagatgctcgac
ctgtacggcaacctggccgacccggccgtgcgccggcagatccagggcgtgcgctcgatg
gcgctggcgccggtgttccgtcgcctgcccgagccgggcccgatcgtgttcgggcgcggc
gtggagattgcgctgcagatcgacgaggtcgcgttttcgggcgcgagcccgtacctgttc
ggtgccgtgctggagcagttcttcagccggcatgtgtcgctcaacgcgttcaccgagttc
gcgctgtccagcctgcagcgcggcgaaattgcgcgctggaccccgcgcgtgggacgccgc
cccaccgtatga

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