KEGG   Variovorax boronicumulans: CKY39_01240
Entry
CKY39_01240       CDS       T05068                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_01240 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_01240 (clpV)
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_01240 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 Clp_N AAA_22 Sigma54_activat NBD_SMAX1 AAA_18 AAA_7 ATPase_2 nSTAND3 AAA_25 nSTAND6 Zeta_toxin NACHT AAA_14 Rad17 T2SSE AAA_24 AAA_30 TsaE DUF815 AAA_33 Hpr_kinase_C MT
Other DBs
NCBI-ProteinID: ATA51999
UniProt: A0A250DDG7
LinkDB
Position
266759..269464
AA seq 901 aa
MTDIRRVSLFSKLNPMLYKALETATAFAKLRGNAYVELVHWLHQILQLQDSDLLRIIKRA
GLNLDAVEQDLVRALDRLPHGATSISDISEHVDHAVERAWVYASLRFEATSIRGAYLLAG
IVKTPGLRQVLSGISREFDKLVPDVLVAQLAAWTEGSPEDDYDAASEAGGGAPVAQHQGD
APAAGGSALAKYASDLTAKARAGELDPVYGRDDEIRQIVDILMRRRQNNPLLTGEAGVGK
TAVVEGLASRLAAGDVPPSLKDVSLWVLDPTLLQAGAGVKGEFEQRLRQVIDEVEKSPKP
IVLFVDEVHTLVGAGGTAGTGDAANLLKPALARGRLRTIGATTWSEYKKYIEKDPALTRR
FQTIQVHEPTEPKAVVMLRGISAELEKHHGVLILDAALEAAVSLSHRYIPARQLPDKAVS
LLDTACARVALSQHALPAALEDLKRRIEVLGIESGIAGREAAIGVGEHQRVEDIAAQVAA
AQAELELLEQRRVEEAALVERIVALRKLLSPAAVPVQSEAEDDREEEAPAEPERTPEAIR
AELNEAQDQLVKLQGETPLILAAVDAQAVATVVADWTGIPIGRMVRDDAQSVLRLGEILS
ARVVAQPDALETISRRIRTARARLDNPNKPVGVFLLCGPSGVGKTETALALSEALYGGEQ
NLVTINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVH
EIFFQVFDKGWMEDGEGRHIDFRNTVIIMTSNVGTDLVMQLCEDPTLRPDPEPLAAALRE
PLLKVFAPALLGRLVVVPYYPLQADALHRIIRLQLDRIAARLQANHGIALAYNDSAVALV
AHRCTAIESGGRMIDAILTHTILPRLSEEVIGATVSARKLAGVQLGAAGDDFQYEFSERP
A
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgaccgacatccgccgcgtctctcttttttcgaaactgaatccgatgctctacaaggca
ttggagaccgccactgccttcgccaagctgcgcggcaatgcctacgtggagctcgtgcac
tggctgcaccagattctgcagctgcaggacagcgacctgctgcgcatcatcaagcgcgcg
gggctcaacctcgacgcggtcgagcaggacctcgtgcgtgcgctcgaccggctgccgcac
ggcgccacgtcgatcagcgacatctccgagcacgtcgaccatgcggtggagcgcgcgtgg
gtctatgccagcctgcgcttcgaagccacctcgatccgcggcgcctacctgctcgcgggc
atcgtgaagacgccgggcctgcgccaggtgctctcgggcatctcgcgcgagttcgataag
ctcgtgcccgacgtgcttgtcgcgcagctcgcggcgtggaccgaaggctcgccggaagac
gactacgacgccgcgtcggaggcgggcggtggtgcaccggtggcgcagcaccagggcgat
gcgcctgcggccggcggctcggccctggccaagtacgcgagcgacctcacggccaaggcg
cgcgccggcgagctcgaccccgtgtacggccgcgacgacgagatccgccagatcgtcgac
atcctcatgcgccggcgccagaacaacccgctgctcaccggcgaggccggcgtcggaaag
accgccgtggtcgaaggcctggcctcgcgcttggctgcaggcgacgtgccgccgtcgctg
aaggacgtgtcgctgtgggtgctcgaccccacgctgctgcaggccggcgcgggcgtgaag
ggcgagttcgaacagcggctgcgccaggtgatcgacgaggtcgagaaaagccccaagccc
atcgtgctgttcgtcgacgaggtgcacacgctggtgggcgcgggcggcaccgccggcacc
ggcgacgcggccaacctgctcaagcctgcgctcgcgcgcgggcggctgcgcaccatcggt
gccacgacgtggtcggaatacaagaagtacatcgagaaagacccggcgctcacgcggcgc
ttccagaccatccaggtgcatgagcccaccgagcccaaggccgtggtcatgctgcgcggc
atctcggccgagctggagaaacaccacggcgtgctcatcctcgacgccgcgctcgaagcg
gccgtgagcctgtcgcaccgctacattcccgcgcgccagctgcccgacaaggccgtgagc
ctgctcgacaccgcgtgcgcgcgcgtggcactgagccagcatgcgctgcctgcggcgctc
gaagacttgaagcggcgcatcgaggtgctgggcatcgagtcgggcatcgcggggcgcgag
gcggcgatcggggtcggcgagcaccagcgcgtggaagacatcgcggcgcaggtggctgcc
gcgcaggctgaactcgagctgttggagcagcggcgcgtggaagaggcggcgctggtcgag
cgcatcgttgcgctgcgcaagctgctgtcgcctgcggcggtgccggtgcaatctgaagcg
gaagatgaccgcgaagaggaagcgccggccgagcccgagcgaacacccgaagccatccgc
gccgaactcaacgaagcgcaagaccagctcgtgaagctgcaaggcgagacaccgctcatc
ctcgcggccgtcgatgcgcaggccgtcgctaccgtggtggccgactggaccggcattccc
atcggccgcatggtgcgcgacgacgcgcagtcggtgctgcgcttgggcgagattttgtcg
gcccgcgtggtcgcgcagcccgatgcgctggagaccatctcgcggcgcatccgcaccgcg
cgtgcgcggctggacaaccccaacaagcccgtcggcgtgttcctgctgtgcggcccatcg
ggcgtgggcaagaccgagaccgcgctcgcgctgtcggaggcgctgtacggcggcgagcag
aacctcgtcaccatcaacatgagcgagttccaggagtcgcacaccgtctccacgctcaag
ggcgcgccgcccggctatgtgggttatggcgaaggcggcgtgctcaccgaggccgtgcgc
cgccggccctacagcgtggtgctgctcgacgagatcgagaaggcccaccccgacgtgcac
gagatcttcttccaggtcttcgacaagggctggatggaagacggcgaaggccgccacatc
gactttcgcaacaccgtgatcatcatgacgtcgaacgtcggcaccgacctcgtcatgcag
ctgtgcgaagacccgacgttgcgccccgaccccgagccgctggctgccgcgctgcgcgag
ccgctgctgaaagtgttcgcgcccgcgctgctcgggcgcctggtggtcgtgccttattac
ccgctgcaggccgatgcgctgcaccggatcattcgcctgcagctggaccgcatcgcggcg
cgtctgcaggccaaccacggcattgcattggcttacaacgacagcgccgtcgcgcttgtc
gcacaccgctgcacggccatagagtcgggtggccggatgatcgacgcgatcctcacgcac
accatcctgccccggctgagcgaggaagtcatcggcgccaccgtcagtgcgcgcaagctc
gccggcgtgcagctgggcgcagcgggcgacgacttccagtacgagttttcagaacgcccc
gcgtag

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