Variovorax boronicumulans: CKY39_01940
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Entry
CKY39_01940 CDS
T05068
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vbo
Variovorax boronicumulans
Pathway
vbo02010
ABC transporters
vbo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKY39_01940
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CKY39_01940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_01940
Transporters [BR:
vbo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CKY39_01940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Glyco_hydro_3_C
Peripla_BP_3
Adhesin_P1_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ATA52120
UniProt:
A0A1E7TXY8
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All DBs
Position
complement(420816..421736)
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AA seq
306 aa
AA seq
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MKSLLKATALVAALACGTTAALAQAPKQPLRIGMTFQELNNPYFVTMKQALEEAAASIGA
TVVTTDARHDVAKQIGDVEDMIQKKIDILLLNPTDSAGVQSAVRSAKKAGVIVVAVDANA
QGPVDSFVGSKNLDAGRLACEYLAKNIGEKGDVAILDGIPVVPILERVKGCREALAKYPG
IKVVSTQNGKQERATALTVTENILQANKNLKGVFSVNDGGSMGALAAIEASGKDVKLTSV
DGAPEAIKAMQKAGSKFIATTAQYPRDQIRLAIGIALAKKWGANVPAAVPVDVKLIDAEG
AKTFSW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccttctcaaagccaccgccctcgtcgccgccctcgcctgcggcaccaccgcc
gcactggcacaggcgcccaagcagccgctgcgcatcggcatgaccttccaggaactgaac
aacccctacttcgtgacgatgaagcaggccctggaagaagccgccgccagcatcggcgcc
accgtggtcaccaccgatgcgcgccatgacgtggccaagcagatcggcgacgtggaagac
atgatccagaagaagatcgacatcctgctgctgaacccgaccgactcggccggcgtgcag
tcggcggtgcgctcggccaagaaggccggcgtgatcgtggtggcggtcgatgccaacgcg
cagggcccggtcgattccttcgtgggctccaagaacctcgacgccggccgcctggcctgc
gagtacctcgcgaagaacatcggcgagaaaggcgacgtggccatcctcgacggcatcccg
gtcgtgccgatcctggagcgcgtgaagggctgccgcgaagcgctggccaagtaccccggc
atcaaggtcgtgagcacgcagaacggcaagcaggagcgcgccaccgcgctcaccgtgacc
gagaacatcctgcaggccaacaagaacctcaagggcgttttcagcgtgaacgacggcggc
tcgatgggcgcgctcgcggccatcgaggccagcggcaaggacgtgaagctcaccagcgtg
gacggcgcacccgaggccatcaaggcgatgcagaaggcgggctcgaagttcatcgccacc
accgcgcagtacccgcgcgaccagatccgcctggccatcggcatcgcgctggcgaagaag
tggggcgccaacgtccccgcggccgtgccggtcgacgtgaagctcatcgacgccgaaggc
gccaagaccttcagctggtaa
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