Variovorax boronicumulans: CKY39_02090
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Entry
CKY39_02090 CDS
T05068
Name
(GenBank) hypothetical protein
Organism
vbo
Variovorax boronicumulans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RicinB_lectin_2
Big_5
Ricin_B_lectin
Laminin_G_3
PKD
PKD_4
CCP_MauG
Laminin_G_2
Y_Y_Y
Laminin_G_1
Cytochrom_C
LVIVD
DUF1924
Cytochrome_CBB3
RoxA-like_Cyt-c
PQQ_3
PKD_3
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
ATA52147
UniProt:
A0A250DCP1
LinkDB
All DBs
Position
complement(453710..458431)
Genome browser
AA seq
1573 aa
AA seq
DB search
MKIRYFLMAFLVPCVTLLTHAAITGVSPMTTLNKMATAAAAVVADPLPLQGPGLGNLTYT
SAELFKPVSMITSAAHPLDPAHSDAYEARDVPATYPGRKDYGMNAGIMVNGYFLTSFAPD
SGLGPGGFLLYDVSNPRQIRLVKKIYEPDDATGGRTKEFRETHSFGTAKIGGKTYVVLPS
INGVEFWDFTDINDIKQVKKLALPGVNSGDYENVSWQLWWQAPYLYVASAGRGMFIVDAT
DPANAVVANRGAGKPNPVPTGELGGFRLGPIFTMGNHMVLTAMESNGGFASLDISDPLNP
KVLDSIAGATPFYYATCFDGKSVHASARGSGAKMYSYDLSDRSRFVAEDNRLVIDEQLYC
ATQDNYVIQGAQTRIHKVDVSNPLNHVEVGRGSILREDDPNFSHSDNGQVAMFGNLVFVG
NDHGSGSGFVVHAVDPDTTKPEVKQVSPANGAKQQALSSRIGLGMTDNILPESVNSNTFI
VRPVGGNTLAGTYSVQLGIVNFHPAQPLLPGTSYEVFLPANGVKDYAGNAIGADYRSTFN
TGNASDINLMHHWPLTGNLGDQIGANNGTPATGDAFESIGLNFANRTAGVPLKNDTVASA
LGGTASLSFYMKTTQAGASNSWTAPGIFGRDQSGGTDDVFWGWLDTGGRIKLSVGNDGGT
TSTAAVNDGNWHHVVLTRDAASGAQAVYVDGVKTTSTGPTGTKGLSTKFQVMGQIQGNTA
LFKGTLAEVRVYGRVLGQAEVDTLRGQAIIGDPGLGGGPKLVNGQLSFNPATLGASGVQF
RWNFGNGTQTAFSNQPNASYTYTTPGHYTVTLTVKDSSGRETYYTYNVTVIAPVTATAPT
HTTNIAGDASRVYSVNPDSGTVAAIDAQTLAKLWEVRVGDEAKTLAVGPDGRIWVAVQGE
DKLVALNAADGSQSVSIPLAYGSGPYGVAFTPNGAKGLLTLESKSVLMSFDPSNGATTGA
LALEGGVRGIAVSADSQVAYVTRFKSKMTGGQLHKVNLQSLTALQTIPLPVDTTTVDTES
RARGVANYLSQVVISPDGSRAVLPSKKDNIVRGRFRDGKDLPHDQTVRSILSQVNLQSAA
EVFSEQIDFDDRAPARAALYSPAGDYLFVAQMEGNRVAIVDSYTRAIRGEINASSAPHGL
YLDAARKRLFVNNFLARSVSVHDVAKVLSAETNAAIFLQNVATVAQEPMAAAALRGKQVF
YNAADRRMSKDNYISCASCHADGGDDGMVWDFTQRGEGLRRTISLQGRRGTSHGKLHWTA
NFDEVQDFENDIRNEFGGTGFLSNADWAATQAPLGAPKAGKSAQLDDLAVYLGSLNKYMR
SPARAADGSLSVDAVRGQTVFNTAQCATCHTGATFRDGLRHDVGTIQASSGKGSNQPLAG
VGFDTPTLSGTWNTTAFFHNGQAATLQDLLAGGHGNASSLPANDVVALREYVRSQDTAPA
VVTRLRSDLNPTMCVNIKGASTTSGATAVQWPCGNAGNEKFTMTPITGGYVQFIAEHSGL
CLAQNGTATTNAAVVQVACSSGNTAQWSLVGGTVRNRASGSCLDVPNGSTTQDTALITWT
CNGGNNQNWTQLP
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccggtatttcctgatggcgttcctggtgccgtgcgtcacattgctgacgcat
gcggcaatcaccggggtcagtccgatgacgaccctcaacaagatggccacggcggctgcc
gctgtcgtggccgacccgctcccgctgcaggggccgggcctgggcaacctcacctacacc
tcggcggaactgttcaagccggtgtcgatgatcaccagcgccgcgcacccgctcgacccg
gcgcacagcgacgcctacgaggcgcgcgacgtgcccgccacgtacccgggccgcaaggac
tacggcatgaacgccggcatcatggtcaacggctacttcctcacctccttcgcgccggac
agcggcctcggccccggcggcttcctgctgtacgacgtgtcgaacccgcgccagatcagg
ctcgtcaagaagatctacgagcccgatgacgcgacaggcggccgcaccaaggaattccgc
gaaacgcactccttcggcaccgcgaagatcggcggcaagacctacgtcgtgctgcccagc
atcaacggcgtcgagttctgggacttcaccgacatcaacgacatcaagcaggtgaagaag
ctggcgctgcccggcgtcaactcgggcgactacgagaacgtgtcctggcagctgtggtgg
caggcgccctacctgtacgtggcctcggccggccggggcatgttcatcgtcgacgcgacg
gaccccgcgaacgcggtggtcgccaaccgcggcgccggcaagcccaacccggtgcccacc
ggcgaactcggcggcttccgcctcggcccgatcttcacgatgggcaaccacatggtgctg
accgcgatggaaagcaacggcggtttcgcgagcctggacatctccgacccgctcaacccc
aaggtgctcgattccatcgccggcgccacgccgttctattacgcgacctgcttcgacggc
aagagcgtgcacgcctctgcgcgcggcagcggcgccaagatgtacagctacgacctgagc
gaccgctcgcgcttcgtggccgaggacaaccggctcgtcatcgacgagcagctgtactgc
gccacgcaggacaactacgtcatccagggcgcgcagacccgcatccacaaggtggacgtg
agcaacccgctcaaccacgtggaggtgggccgcggcagcatcctgcgcgaggacgacccg
aacttctcgcattcggacaacggccaggtcgcgatgttcggcaacctcgtcttcgtgggc
aacgaccacggctcgggcagcggcttcgtcgtgcacgcggtagaccccgacaccaccaag
cccgaagtgaagcaggtctcgcccgccaacggtgcgaagcagcaggccctcagctcgcgc
atcggcctgggcatgaccgacaacatcctgcccgagagcgtgaacagcaacaccttcatc
gtgcgcccggtgggcggcaacacgctggcgggcacctacagcgtgcagctgggcatcgtc
aacttccatcccgcgcagccgctgctgccgggcaccagctatgaggtgttcctgccggcc
aacggcgtgaaggactatgcgggcaacgccatcggcgccgactaccgctccaccttcaac
accggcaacgccagcgacatcaacctgatgcaccactggccgctgacgggcaacctgggc
gaccagatcggcgccaacaacggcacgcccgccaccggcgacgcgttcgagagcatcggc
ctgaacttcgcgaaccgcactgccggcgtgccgctgaagaacgacaccgtggccagcgcg
ctgggcggcacggcctcgctgagcttctacatgaagaccacgcaggccggcgcctccaac
tcgtggaccgcgcccggcatcttcggtcgcgaccagtcgggcggcaccgacgacgtgttc
tggggctggctggacaccggcgggcgcatcaagctctcggtgggcaacgacggcggcacc
acctccaccgcggccgtgaacgacggcaactggcaccacgtcgtgctcacgcgcgacgcg
gcctcgggcgcgcaggcggtgtacgtcgacggcgtgaagaccacctcgaccgggccgacc
ggcaccaagggcctgtcgaccaagttccaggtcatgggccagatccagggcaacaccgcg
ctcttcaagggcacgctggccgaggtgcgcgtgtacggccgcgtgctcggccaggccgag
gtggacacgctgcgcggccaggccatcatcggcgacccgggcctgggcggcgggcccaag
ctggtcaacggccagctgagcttcaaccccgcgacgctcggcgccagcggcgtgcagttc
cgctggaacttcggcaacggcacgcagacggcgttctcgaaccagcccaacgccagctac
acctacaccacccccggccactacacggtgaccctgacggtgaaggacagcagcggccgc
gagacctactacacctacaacgtgaccgtcatcgcgccggtcaccgcgaccgcgcccacg
cacacgaccaacatcgcgggcgatgcgagccgggtgtactcggtgaaccccgacagcggc
acggtggccgccatcgatgcgcagacccttgccaaactgtgggaagtgcgcgtgggcgac
gaggccaagacgctggccgtcggccccgacggccgcatctgggtcgcggtgcagggcgag
gacaagctggtggcgctcaacgccgccgacggctcgcagtcggtgtcgatcccgctggcc
tacggcagcggcccgtacggcgtggccttcacgcccaacggcgccaagggcctgctcacg
ctggaaagcaagtcggtgctcatgagcttcgaccccagcaacggcgccaccaccggcgcg
ctggcgctcgagggcggcgtgcgcggcatcgccgtgagcgccgactcgcaggtggcctac
gtcacgcgcttcaagtcgaagatgacgggcggccagctgcacaaggtgaacctgcagtcg
ctgaccgcgctgcagaccatcccgctgccggtggacaccacgaccgtcgacaccgagagc
cgcgcgcgcggcgtggccaactacctgagccaggtggtgatctcgcccgacggctcgcgt
gccgtgctgccttcgaagaaggacaacatcgtgcgcggccgcttccgcgacggcaaggac
ctgccgcacgaccagacggtgcgctcgatcctgtcgcaggtgaacctgcaaagcgccgcc
gaggtgttctccgagcagatcgacttcgacgaccgcgcccccgcgcgcgccgcgctgtat
tcgcccgccggcgactacctgttcgtggcgcagatggaaggcaaccgcgtcgccatcgtc
gacagctacacccgcgcgattcgcggcgagatcaacgccagcagcgccccgcatggcctg
tacctcgatgcggcgcgcaagcggttgttcgtgaacaacttcctggcgcgctcggtgtcg
gtgcacgacgtggcgaaggtgctgtcggccgagaccaatgcggcgatcttcctgcagaac
gtggccaccgtggcgcaggagccgatggcggccgcggcgctgcgcggcaagcaggtgttc
tacaacgcggccgaccggcgcatgagcaaggacaactacatctcctgcgccagctgccac
gcggacggcggcgacgatggcatggtgtgggacttcacccagcgcggcgagggcctgcgc
cgcaccatcagcctgcagggccggcgcggcaccagccacggcaagctgcactggaccgcc
aacttcgacgaagtgcaggacttcgagaacgacatccgcaacgagttcggcggcaccggc
ttcctgagcaacgccgactgggccgccacgcaggccccgctgggcgctccgaaggccggc
aagagcgcgcagctggacgacctggccgtgtacctgggatcgctcaacaagtacatgcgc
agtccggcccgcgccgcggacggcagcctgagcgtggacgcggtgcgcggacagaccgtg
ttcaacacggcccagtgcgccacctgccacacgggcgccaccttccgcgacgggttgcgg
cacgacgtgggcaccatccaggcctcgtcgggcaagggcagcaaccagccgctggcgggc
gtgggcttcgacacgccgaccctgtcgggaacctggaacaccaccgcgttcttccacaac
ggccaggcggccacgctgcaggacctgctcgcgggcggccacggcaacgcctccagcctg
ccggcgaacgacgtggtggcgctgcgcgagtacgtgcgctcgcaggacaccgccccggcg
gtggtcacgcggctgcgctccgacctcaacccgacgatgtgcgtgaacatcaagggcgcc
tcgaccaccagcggtgcgacggcggtgcagtggccgtgcggcaacgcgggcaacgagaaa
ttcacgatgacgccgatcaccggcggctacgtgcagttcatcgccgagcacagcggcctg
tgcctggcgcagaacggcacggcgaccacgaacgcggccgtcgtgcaggtggcctgctcg
tcgggcaacacggcgcagtggagcctggtgggcggcacggtgcgcaaccgcgcctcgggc
tcgtgcctggacgtgccgaacggctcgaccacgcaggacacggcgctgatcacctggacc
tgcaacggcggcaacaaccagaactggacgcagctgccgtaa
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